Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC23■■□□□ 1.27
COL22A1Q8NFW1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC23■■□□□ 1.27
COL22A1Q8NFW1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL22A1Q8NFW1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL22A1Q8NFW1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL22A1Q8NFW1 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
COL22A1Q8NFW1 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC23■■□□□ 1.27
COL22A1Q8NFW1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC23■■□□□ 1.27
COL22A1Q8NFW1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC23■■□□□ 1.27
COL22A1Q8NFW1 MIR6805-201ENST00000615055 62 ntBASIC23■■□□□ 1.27
COL22A1Q8NFW1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC23■■□□□ 1.27
COL22A1Q8NFW1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC23■■□□□ 1.27
COL22A1Q8NFW1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23■■□□□ 1.27
COL22A1Q8NFW1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 MTRF1LP2-201ENST00000506027 1122 ntBASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 AC012569.1-201ENST00000591191 1524 ntBASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC22.99■■□□□ 1.27
COL22A1Q8NFW1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 HLA-V-204ENST00000476601 1289 ntBASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 AC119751.2-201ENST00000504529 210 ntBASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 POLE2-203ENST00000553805 496 ntTSL 2 BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 TEX28P1-201ENST00000613479 1221 ntBASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 TEX28P2-201ENST00000617764 1221 ntBASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 AL020996.1-203ENST00000536896 2307 ntBASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC22.98■■□□□ 1.27
COL22A1Q8NFW1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 RNA5-8SN1-201ENST00000610460 153 ntBASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 RNA5-8SN5-202ENST00000612463 153 ntBASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 RNA5-8SN4-201ENST00000613359 153 ntBASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 RNA5-8SN5-201ENST00000619471 153 ntBASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 AC106886.1-201ENST00000568660 600 ntBASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 Six3os1_5.1-201ENST00000611000 271 ntBASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 AL033527.4-201ENST00000641026 673 ntBASIC22.97■■□□□ 1.27
COL22A1Q8NFW1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC22.96■■□□□ 1.27
COL22A1Q8NFW1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
COL22A1Q8NFW1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
COL22A1Q8NFW1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL22A1Q8NFW1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL22A1Q8NFW1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
COL22A1Q8NFW1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC22.96■■□□□ 1.27
COL22A1Q8NFW1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
COL22A1Q8NFW1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
COL22A1Q8NFW1 FOXO1B-201ENST00000504678 1527 ntBASIC22.96■■□□□ 1.27
COL22A1Q8NFW1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms