Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 SPDYE21P-201ENST00000413323 827 ntBASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 AC122714.2-201ENST00000502787 707 ntBASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 AC018845.2-201ENST00000568326 409 ntBASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 AD001527.2-201ENST00000622994 785 ntBASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 AC004817.3-201ENST00000602957 2129 ntBASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.69■□□□□ 0.26
ZNF248Q8NDW4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 LINC01126-201ENST00000623515 1646 ntBASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 PRSS29P-201ENST00000440800 595 ntBASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 AC108073.2-201ENST00000464002 357 ntBASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 AC004706.3-202ENST00000621574 984 ntBASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF248Q8NDW4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 GPR89P-201ENST00000407924 1495 ntBASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 KRT8P47-201ENST00000604727 1398 ntBASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 AL499627.1-201ENST00000569373 2188 ntBASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 HCG4B-203ENST00000450128 991 ntBASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms