Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 AC133963.1-201ENST00000504166 1679 ntBASIC17.27■□□□□ 0.36
SNX31Q8N9S9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 DDX43P3-201ENST00000441064 443 ntBASIC17.27■□□□□ 0.36
SNX31Q8N9S9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNX31Q8N9S9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNX31Q8N9S9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNX31Q8N9S9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNX31Q8N9S9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNX31Q8N9S9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNX31Q8N9S9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SNX31Q8N9S9 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SNX31Q8N9S9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 AC068472.1-201ENST00000474589 881 ntBASIC17.26■□□□□ 0.35
SNX31Q8N9S9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 AL049597.2-201ENST00000565575 961 ntBASIC17.26■□□□□ 0.35
SNX31Q8N9S9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX31Q8N9S9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX31Q8N9S9 LINC00304-203ENST00000565008 1864 ntBASIC17.24■□□□□ 0.35
SNX31Q8N9S9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.24■□□□□ 0.35
SNX31Q8N9S9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
SNX31Q8N9S9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX31Q8N9S9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.24■□□□□ 0.35
SNX31Q8N9S9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX31Q8N9S9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX31Q8N9S9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms