Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 AC097637.2-201ENST00000624096 1997 ntBASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 RPS2P28-201ENST00000314255 741 ntBASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 ACTG1P4-201ENST00000425123 1122 ntBASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 AC139887.3-201ENST00000568585 713 ntBASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 AC148477.8-201ENST00000624298 468 ntBASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.24■□□□□ 0.35
TRAM1L1Q8N609 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 AL031284.1-201ENST00000419297 478 ntBASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 HNRNPDP1-201ENST00000439535 754 ntBASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 FDX1P1-201ENST00000449115 551 ntBASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAM1L1Q8N609 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 LINC00982-205ENST00000420957 435 ntBASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 FAM215A-202ENST00000632077 792 ntBASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAM1L1Q8N609 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms