Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CCDC71Q8IV32 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 KRT17P6-201ENST00000453795 1220 ntBASIC16.39■□□□□ 0.21
CCDC71Q8IV32 AC009078.2-202ENST00000463353 338 ntBASIC16.39■□□□□ 0.21
CCDC71Q8IV32 AC104819.1-201ENST00000504587 486 ntBASIC16.39■□□□□ 0.21
CCDC71Q8IV32 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 DUTP2-201ENST00000519164 463 ntBASIC16.39■□□□□ 0.21
CCDC71Q8IV32 AC012615.1-201ENST00000565797 1299 ntBASIC16.39■□□□□ 0.21
CCDC71Q8IV32 LINC01711-201ENST00000598340 967 ntBASIC16.39■□□□□ 0.21
CCDC71Q8IV32 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 AL390719.2-201ENST00000606993 987 ntBASIC16.39■□□□□ 0.21
CCDC71Q8IV32 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 AC046158.3-201ENST00000624947 2558 ntBASIC16.39■□□□□ 0.21
CCDC71Q8IV32 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC71Q8IV32 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 PVRIG2P-201ENST00000435460 978 ntBASIC16.38■□□□□ 0.21
CCDC71Q8IV32 AP000347.1-202ENST00000435868 847 ntBASIC16.38■□□□□ 0.21
CCDC71Q8IV32 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 AC074051.2-201ENST00000565115 352 ntBASIC16.38■□□□□ 0.21
CCDC71Q8IV32 AC090616.6-201ENST00000582640 721 ntBASIC16.38■□□□□ 0.21
CCDC71Q8IV32 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 AC138894.3-201ENST00000603787 634 ntBASIC16.38■□□□□ 0.21
CCDC71Q8IV32 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 AL031008.1-201ENST00000619963 541 ntBASIC16.38■□□□□ 0.21
CCDC71Q8IV32 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71Q8IV32 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms