Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VPS13CQ709C8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
VPS13CQ709C8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS13CQ709C8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS13CQ709C8 AC092580.3-201ENST00000430932 139 ntBASIC14.42□□□□□ -0.1
VPS13CQ709C8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS13CQ709C8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 ACTL9-202ENST00000612068 1252 ntBASIC14.42□□□□□ -0.1
VPS13CQ709C8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.42□□□□□ -0.1
VPS13CQ709C8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 AL590787.1-201ENST00000568856 1315 ntBASIC14.41□□□□□ -0.1
VPS13CQ709C8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13CQ709C8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13CQ709C8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13CQ709C8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13CQ709C8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13CQ709C8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13CQ709C8 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.41□□□□□ -0.1
VPS13CQ709C8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.41□□□□□ -0.1
VPS13CQ709C8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13CQ709C8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13CQ709C8 AC009336.1-201ENST00000608941 1553 ntBASIC14.41□□□□□ -0.1
VPS13CQ709C8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13CQ709C8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 AC022494.1-201ENST00000466044 728 ntBASIC14.41□□□□□ -0.1
VPS13CQ709C8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13CQ709C8 AC109462.3-201ENST00000573934 613 ntBASIC14.41□□□□□ -0.1
VPS13CQ709C8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13CQ709C8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13CQ709C8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 COX5BP2-201ENST00000392354 334 ntBASIC14.41□□□□□ -0.1
VPS13CQ709C8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 AC067863.1-201ENST00000494933 530 ntBASIC14.41□□□□□ -0.1
VPS13CQ709C8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13CQ709C8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS13CQ709C8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13CQ709C8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
VPS13CQ709C8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
VPS13CQ709C8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13CQ709C8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13CQ709C8 AL020996.1-203ENST00000536896 2307 ntBASIC14.4□□□□□ -0.1
VPS13CQ709C8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13CQ709C8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.4□□□□□ -0.1
VPS13CQ709C8 AC140658.5-201ENST00000438532 169 ntBASIC14.4□□□□□ -0.1
VPS13CQ709C8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13CQ709C8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.4□□□□□ -0.1
VPS13CQ709C8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
VPS13CQ709C8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13CQ709C8 AC006116.8-202ENST00000587620 1550 ntBASIC14.4□□□□□ -0.1
VPS13CQ709C8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13CQ709C8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
VPS13CQ709C8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13CQ709C8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS13CQ709C8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13CQ709C8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13CQ709C8 PIN1P1-201ENST00000412108 996 ntBASIC14.4□□□□□ -0.1
VPS13CQ709C8 BASP1P1-201ENST00000430708 665 ntBASIC14.4□□□□□ -0.1
VPS13CQ709C8 FAM185BP-201ENST00000443595 716 ntBASIC14.4□□□□□ -0.1
VPS13CQ709C8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.4□□□□□ -0.1
VPS13CQ709C8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS13CQ709C8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13CQ709C8 HILS1-202ENST00000545329 423 ntBASIC14.4□□□□□ -0.1
VPS13CQ709C8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13CQ709C8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13CQ709C8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13CQ709C8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS13CQ709C8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13CQ709C8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms