Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TREML4Q6UXN2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 MIR940-201ENST00000401276 94 ntBASIC14.35□□□□□ -0.11
TREML4Q6UXN2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 FAM197Y8-203ENST00000450145 560 ntBASIC14.35□□□□□ -0.11
TREML4Q6UXN2 RNA5SP419-201ENST00000515908 135 ntBASIC14.35□□□□□ -0.11
TREML4Q6UXN2 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 AC106730.1-201ENST00000566722 1090 ntBASIC14.35□□□□□ -0.11
TREML4Q6UXN2 MIR3917-201ENST00000580971 93 ntBASIC14.35□□□□□ -0.11
TREML4Q6UXN2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.35□□□□□ -0.11
TREML4Q6UXN2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 LINC00602-201ENST00000629776 2065 ntBASIC14.35□□□□□ -0.11
TREML4Q6UXN2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TREML4Q6UXN2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 AL355312.1-201ENST00000407115 2176 ntBASIC14.34□□□□□ -0.11
TREML4Q6UXN2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 Z97985.1-201ENST00000332270 946 ntBASIC14.34□□□□□ -0.11
TREML4Q6UXN2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 AL031284.1-201ENST00000419297 478 ntBASIC14.34□□□□□ -0.11
TREML4Q6UXN2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.34□□□□□ -0.11
TREML4Q6UXN2 AC005104.2-201ENST00000427818 678 ntBASIC14.34□□□□□ -0.11
TREML4Q6UXN2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 AF238378.1-201ENST00000526806 358 ntBASIC14.34□□□□□ -0.11
TREML4Q6UXN2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 AL355385.1-201ENST00000606123 409 ntBASIC14.34□□□□□ -0.11
TREML4Q6UXN2 AL139424.1-201ENST00000607572 797 ntBASIC14.34□□□□□ -0.11
TREML4Q6UXN2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 AL691403.2-201ENST00000618460 490 ntBASIC14.34□□□□□ -0.11
TREML4Q6UXN2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 AC112497.1-201ENST00000624824 639 ntBASIC14.34□□□□□ -0.11
TREML4Q6UXN2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms