Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 AP002383.4-201ENST00000442518 975 ntBASIC18.12■□□□□ 0.49
LRRC38Q5VT99 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 Z69720.1-201ENST00000601483 472 ntBASIC18.12■□□□□ 0.49
LRRC38Q5VT99 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 AL590326.2-201ENST00000625139 305 ntBASIC18.12■□□□□ 0.49
LRRC38Q5VT99 KRT18P1-202ENST00000452408 1331 ntBASIC18.12■□□□□ 0.49
LRRC38Q5VT99 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 AC132938.5-201ENST00000624980 1813 ntBASIC18.12■□□□□ 0.49
LRRC38Q5VT99 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC38Q5VT99 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 PCED1CP-201ENST00000419887 785 ntBASIC18.11■□□□□ 0.49
LRRC38Q5VT99 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 STK19B-204ENST00000512515 211 ntBASIC18.11■□□□□ 0.49
LRRC38Q5VT99 TPSP2-201ENST00000561760 610 ntBASIC18.11■□□□□ 0.49
LRRC38Q5VT99 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 EGFEM1P-202ENST00000431685 1563 ntBASIC18.11■□□□□ 0.49
LRRC38Q5VT99 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 AL135999.2-201ENST00000622438 1686 ntBASIC18.11■□□□□ 0.49
LRRC38Q5VT99 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC38Q5VT99 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms