Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 CXCL1P1-201ENST00000502804 216 ntBASIC20.81■□□□□ 0.92
PDS5AQ29RF7 KRT19P2-202ENST00000557173 1012 ntBASIC20.81■□□□□ 0.92
PDS5AQ29RF7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 MKNK2P1-201ENST00000437526 628 ntBASIC20.8■□□□□ 0.92
PDS5AQ29RF7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 ACTL9-202ENST00000612068 1252 ntBASIC20.8■□□□□ 0.92
PDS5AQ29RF7 C20orf181-201ENST00000623918 480 ntBASIC20.8■□□□□ 0.92
PDS5AQ29RF7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.8■□□□□ 0.92
PDS5AQ29RF7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 AP006288.1-201ENST00000446065 395 ntBASIC20.79■□□□□ 0.92
PDS5AQ29RF7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 AC004877.2-201ENST00000623941 599 ntBASIC20.79■□□□□ 0.92
PDS5AQ29RF7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 AC007613.1-201ENST00000572811 2597 ntBASIC20.79■□□□□ 0.92
PDS5AQ29RF7 AC129492.6-201ENST00000611383 1305 ntBASIC20.79■□□□□ 0.92
PDS5AQ29RF7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.79■□□□□ 0.92
PDS5AQ29RF7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.79■□□□□ 0.92
PDS5AQ29RF7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 AC004967.1-201ENST00000453589 447 ntBASIC20.78■□□□□ 0.92
PDS5AQ29RF7 AC016396.2-201ENST00000562575 1417 ntBASIC20.78■□□□□ 0.92
PDS5AQ29RF7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 AL138688.1-201ENST00000624851 1594 ntBASIC20.78■□□□□ 0.92
PDS5AQ29RF7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms