Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 AC024563.2-201ENST00000603282 481 ntBASIC13.42□□□□□ -0.26
HIST1H1AQ02539 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 AC022211.2-201ENST00000585075 2527 ntBASIC13.42□□□□□ -0.26
HIST1H1AQ02539 PCDH8P1-201ENST00000428983 2773 ntBASIC13.42□□□□□ -0.26
HIST1H1AQ02539 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HIST1H1AQ02539 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 LINC00167-201ENST00000530583 1419 ntBASIC13.41□□□□□ -0.26
HIST1H1AQ02539 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 AC063926.3-201ENST00000624734 5658 ntBASIC13.41□□□□□ -0.26
HIST1H1AQ02539 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 RASA4DP-201ENST00000460726 1199 ntBASIC13.41□□□□□ -0.26
HIST1H1AQ02539 COX11P1-201ENST00000489116 835 ntBASIC13.41□□□□□ -0.26
HIST1H1AQ02539 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 AC116407.2-201ENST00000613639 860 ntBASIC13.41□□□□□ -0.26
HIST1H1AQ02539 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 AL138966.2-201ENST00000621997 464 ntBASIC13.41□□□□□ -0.26
HIST1H1AQ02539 AC133561.5-201ENST00000635547 218 ntBASIC13.41□□□□□ -0.26
HIST1H1AQ02539 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 FLJ38576-201ENST00000623820 2459 ntBASIC13.41□□□□□ -0.26
HIST1H1AQ02539 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H1AQ02539 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms