Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN4P51793 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN4P51793 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCN4P51793 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCN4P51793 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CLCN4P51793 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN4P51793 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN4P51793 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.29■□□□□ 0.52
CLCN4P51793 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLCN4P51793 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN4P51793 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN4P51793 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLCN4P51793 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CLCN4P51793 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN4P51793 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.29■□□□□ 0.52
CLCN4P51793 TSEN15P1-201ENST00000423257 515 ntBASIC18.29■□□□□ 0.52
CLCN4P51793 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.29■□□□□ 0.52
CLCN4P51793 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.29■□□□□ 0.52
CLCN4P51793 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.29■□□□□ 0.52
CLCN4P51793 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.29■□□□□ 0.52
CLCN4P51793 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLCN4P51793 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CLCN4P51793 AC093028.1-201ENST00000622998 982 ntBASIC18.29■□□□□ 0.52
CLCN4P51793 AC092902.6-201ENST00000641783 218 ntBASIC18.29■□□□□ 0.52
CLCN4P51793 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN4P51793 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN4P51793 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCN4P51793 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN4P51793 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCN4P51793 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.29■□□□□ 0.52
CLCN4P51793 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN4P51793 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CLCN4P51793 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN4P51793 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.29■□□□□ 0.52
CLCN4P51793 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CLCN4P51793 AL390961.4-201ENST00000623958 2535 ntBASIC18.28■□□□□ 0.52
CLCN4P51793 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCN4P51793 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN4P51793 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN4P51793 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCN4P51793 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN4P51793 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CLCN4P51793 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCN4P51793 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.28■□□□□ 0.52
CLCN4P51793 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN4P51793 ABALON-201ENST00000629058 1903 ntBASIC18.28■□□□□ 0.52
CLCN4P51793 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN4P51793 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN4P51793 AL139400.1-201ENST00000366220 510 ntBASIC18.28■□□□□ 0.52
CLCN4P51793 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.28■□□□□ 0.52
CLCN4P51793 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.28■□□□□ 0.52
CLCN4P51793 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.28■□□□□ 0.52
CLCN4P51793 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN4P51793 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.28■□□□□ 0.52
CLCN4P51793 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.28■□□□□ 0.52
CLCN4P51793 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.28■□□□□ 0.52
CLCN4P51793 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLCN4P51793 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.28■□□□□ 0.52
CLCN4P51793 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN4P51793 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.28■□□□□ 0.52
CLCN4P51793 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCN4P51793 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN4P51793 AL513210.1-201ENST00000629608 234 ntBASIC18.28■□□□□ 0.52
CLCN4P51793 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN4P51793 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN4P51793 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN4P51793 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCN4P51793 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN4P51793 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCN4P51793 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLCN4P51793 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLCN4P51793 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN4P51793 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN4P51793 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN4P51793 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCN4P51793 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN4P51793 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.27■□□□□ 0.52
CLCN4P51793 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CLCN4P51793 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.27■□□□□ 0.52
CLCN4P51793 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLCN4P51793 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCN4P51793 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.27■□□□□ 0.52
CLCN4P51793 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN4P51793 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN4P51793 MIR770-201ENST00000390219 98 ntBASIC18.27■□□□□ 0.52
CLCN4P51793 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCN4P51793 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CLCN4P51793 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCN4P51793 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLCN4P51793 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.27■□□□□ 0.52
CLCN4P51793 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCN4P51793 AC068137.2-201ENST00000605408 478 ntBASIC18.27■□□□□ 0.52
CLCN4P51793 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.27■□□□□ 0.52
CLCN4P51793 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN4P51793 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN4P51793 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN4P51793 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCN4P51793 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CLCN4P51793 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCN4P51793 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms