Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT6CP48668 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.97■□□□□ 0.31
KRT6CP48668 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.97■□□□□ 0.31
KRT6CP48668 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT6CP48668 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
KRT6CP48668 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
KRT6CP48668 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT6CP48668 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT6CP48668 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
KRT6CP48668 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT6CP48668 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KRT6CP48668 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT6CP48668 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT6CP48668 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT6CP48668 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT6CP48668 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
KRT6CP48668 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KRT6CP48668 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6CP48668 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6CP48668 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6CP48668 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6CP48668 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
KRT6CP48668 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
KRT6CP48668 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6CP48668 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6CP48668 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
KRT6CP48668 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.96■□□□□ 0.31
KRT6CP48668 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
KRT6CP48668 TSPY22P-201ENST00000427496 604 ntBASIC16.96■□□□□ 0.31
KRT6CP48668 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.96■□□□□ 0.31
KRT6CP48668 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.96■□□□□ 0.31
KRT6CP48668 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6CP48668 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6CP48668 RN7SL850P-201ENST00000579959 291 ntBASIC16.96■□□□□ 0.31
KRT6CP48668 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
KRT6CP48668 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.96■□□□□ 0.31
KRT6CP48668 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6CP48668 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6CP48668 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.96■□□□□ 0.31
KRT6CP48668 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.96■□□□□ 0.31
KRT6CP48668 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
KRT6CP48668 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6CP48668 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6CP48668 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6CP48668 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6CP48668 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.96■□□□□ 0.3
KRT6CP48668 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KRT6CP48668 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.96■□□□□ 0.3
KRT6CP48668 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.96■□□□□ 0.3
KRT6CP48668 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KRT6CP48668 AL121761.2-201ENST00000598007 1648 ntBASIC16.96■□□□□ 0.3
KRT6CP48668 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.96■□□□□ 0.3
KRT6CP48668 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.96■□□□□ 0.3
KRT6CP48668 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KRT6CP48668 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.95■□□□□ 0.3
KRT6CP48668 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
KRT6CP48668 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 AC010460.3-201ENST00000511359 1579 ntBASIC16.95■□□□□ 0.3
KRT6CP48668 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
KRT6CP48668 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 MYCLP1-201ENST00000372451 1075 ntBASIC16.95■□□□□ 0.3
KRT6CP48668 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.95■□□□□ 0.3
KRT6CP48668 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
KRT6CP48668 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
KRT6CP48668 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
KRT6CP48668 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
KRT6CP48668 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
KRT6CP48668 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.95■□□□□ 0.3
KRT6CP48668 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
KRT6CP48668 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
KRT6CP48668 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6CP48668 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
KRT6CP48668 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 AD000864.1-201ENST00000624076 2295 ntBASIC16.94■□□□□ 0.3
KRT6CP48668 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
KRT6CP48668 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 AL513477.1-201ENST00000602865 2407 ntBASIC16.94■□□□□ 0.3
KRT6CP48668 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT6CP48668 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms