Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V1AP38606 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V1AP38606 KLK8-202ENST00000320838 456 ntTSL 5 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V1AP38606 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V1AP38606 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V1AP38606 PMS2P4-201ENST00000412466 1052 ntBASIC22.1■■□□□ 1.13
ATP6V1AP38606 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V1AP38606 INGX-202ENST00000489074 768 ntBASIC22.1■■□□□ 1.13
ATP6V1AP38606 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 AC079140.1-201ENST00000508039 487 ntBASIC22.1■■□□□ 1.13
ATP6V1AP38606 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 AC190387.1-201ENST00000551683 408 ntBASIC22.1■■□□□ 1.13
ATP6V1AP38606 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V1AP38606 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V1AP38606 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V1AP38606 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V1AP38606 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.1■■□□□ 1.13
ATP6V1AP38606 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V1AP38606 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V1AP38606 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V1AP38606 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V1AP38606 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V1AP38606 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V1AP38606 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
ATP6V1AP38606 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
ATP6V1AP38606 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V1AP38606 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC22.09■■□□□ 1.13
ATP6V1AP38606 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC22.09■■□□□ 1.13
ATP6V1AP38606 AC069335.1-201ENST00000489972 472 ntBASIC22.09■■□□□ 1.13
ATP6V1AP38606 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC22.09■■□□□ 1.13
ATP6V1AP38606 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
ATP6V1AP38606 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V1AP38606 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.09■■□□□ 1.13
ATP6V1AP38606 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
ATP6V1AP38606 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V1AP38606 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V1AP38606 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V1AP38606 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC22.09■■□□□ 1.13
ATP6V1AP38606 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC22.09■■□□□ 1.13
ATP6V1AP38606 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
ATP6V1AP38606 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.09■■□□□ 1.13
ATP6V1AP38606 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
ATP6V1AP38606 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V1AP38606 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V1AP38606 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP6V1AP38606 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
ATP6V1AP38606 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.08■■□□□ 1.13
ATP6V1AP38606 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V1AP38606 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V1AP38606 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V1AP38606 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
ATP6V1AP38606 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
ATP6V1AP38606 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V1AP38606 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V1AP38606 TFAMP1-201ENST00000412727 736 ntBASIC22.08■■□□□ 1.13
ATP6V1AP38606 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC22.08■■□□□ 1.13
ATP6V1AP38606 FAM58DP-201ENST00000428076 619 ntBASIC22.08■■□□□ 1.13
ATP6V1AP38606 CNN2P2-201ENST00000443536 909 ntBASIC22.08■■□□□ 1.13
ATP6V1AP38606 CNN2P3-201ENST00000450201 906 ntBASIC22.08■■□□□ 1.13
ATP6V1AP38606 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V1AP38606 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC22.08■■□□□ 1.13
ATP6V1AP38606 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC22.08■■□□□ 1.13
ATP6V1AP38606 AC243562.1-201ENST00000560672 389 ntBASIC22.08■■□□□ 1.13
ATP6V1AP38606 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC22.08■■□□□ 1.13
ATP6V1AP38606 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP6V1AP38606 AL136317.3-201ENST00000618497 906 ntBASIC22.08■■□□□ 1.13
ATP6V1AP38606 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC22.08■■□□□ 1.13
ATP6V1AP38606 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
ATP6V1AP38606 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
ATP6V1AP38606 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
ATP6V1AP38606 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
ATP6V1AP38606 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
ATP6V1AP38606 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
ATP6V1AP38606 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.07■■□□□ 1.12
ATP6V1AP38606 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
ATP6V1AP38606 HARS-203ENST00000431330 1774 ntTSL 2 BASIC22.07■■□□□ 1.12
ATP6V1AP38606 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V1AP38606 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
ATP6V1AP38606 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V1AP38606 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V1AP38606 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
ATP6V1AP38606 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V1AP38606 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V1AP38606 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V1AP38606 AC055876.3-201ENST00000431496 288 ntBASIC22.07■■□□□ 1.12
ATP6V1AP38606 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V1AP38606 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms