Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMLP26374 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMLP26374 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.05■□□□□ 0.96
CHMLP26374 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMLP26374 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMLP26374 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMLP26374 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMLP26374 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMLP26374 AC003669.1-201ENST00000334569 611 ntBASIC21.05■□□□□ 0.96
CHMLP26374 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CHMLP26374 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.05■□□□□ 0.96
CHMLP26374 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.05■□□□□ 0.96
CHMLP26374 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.05■□□□□ 0.96
CHMLP26374 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.05■□□□□ 0.96
CHMLP26374 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.05■□□□□ 0.96
CHMLP26374 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.05■□□□□ 0.96
CHMLP26374 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMLP26374 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.05■□□□□ 0.96
CHMLP26374 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMLP26374 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMLP26374 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMLP26374 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMLP26374 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CHMLP26374 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMLP26374 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMLP26374 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CHMLP26374 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.04■□□□□ 0.96
CHMLP26374 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.04■□□□□ 0.96
CHMLP26374 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
CHMLP26374 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CHMLP26374 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.04■□□□□ 0.96
CHMLP26374 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.04■□□□□ 0.96
CHMLP26374 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.04■□□□□ 0.96
CHMLP26374 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
CHMLP26374 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.04■□□□□ 0.96
CHMLP26374 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CHMLP26374 MIR5100-201ENST00000579544 119 ntBASIC21.04■□□□□ 0.96
CHMLP26374 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.04■□□□□ 0.96
CHMLP26374 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CHMLP26374 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.04■□□□□ 0.96
CHMLP26374 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CHMLP26374 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CHMLP26374 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.04■□□□□ 0.96
CHMLP26374 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.04■□□□□ 0.96
CHMLP26374 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CHMLP26374 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CHMLP26374 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMLP26374 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CHMLP26374 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMLP26374 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CHMLP26374 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMLP26374 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.03■□□□□ 0.96
CHMLP26374 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.03■□□□□ 0.96
CHMLP26374 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMLP26374 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMLP26374 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHMLP26374 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMLP26374 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
CHMLP26374 KLF4P1-201ENST00000412782 1185 ntBASIC21.03■□□□□ 0.96
CHMLP26374 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.03■□□□□ 0.96
CHMLP26374 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CHMLP26374 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.03■□□□□ 0.96
CHMLP26374 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.03■□□□□ 0.96
CHMLP26374 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.03■□□□□ 0.96
CHMLP26374 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHMLP26374 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.03■□□□□ 0.96
CHMLP26374 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CHMLP26374 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHMLP26374 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHMLP26374 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMLP26374 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.03■□□□□ 0.96
CHMLP26374 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CHMLP26374 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.03■□□□□ 0.96
CHMLP26374 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMLP26374 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHMLP26374 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMLP26374 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.02■□□□□ 0.96
CHMLP26374 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHMLP26374 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMLP26374 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMLP26374 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHMLP26374 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CHMLP26374 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms