Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 AC079781.3-201ENST00000449110 356 ntBASIC20.08■□□□□ 0.81
SCG2P13521 PRYP5-201ENST00000451909 266 ntBASIC20.08■□□□□ 0.81
SCG2P13521 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.08■□□□□ 0.81
SCG2P13521 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.08■□□□□ 0.81
SCG2P13521 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.08■□□□□ 0.81
SCG2P13521 AL121912.1-201ENST00000603683 238 ntBASIC20.08■□□□□ 0.81
SCG2P13521 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.08■□□□□ 0.81
SCG2P13521 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SCG2P13521 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SCG2P13521 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SCG2P13521 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCG2P13521 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.08■□□□□ 0.8
SCG2P13521 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCG2P13521 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SCG2P13521 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.07■□□□□ 0.8
SCG2P13521 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SCG2P13521 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.07■□□□□ 0.8
SCG2P13521 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.07■□□□□ 0.8
SCG2P13521 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SCG2P13521 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCG2P13521 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCG2P13521 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCG2P13521 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCG2P13521 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.07■□□□□ 0.8
SCG2P13521 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.07■□□□□ 0.8
SCG2P13521 SCARNA2-201ENST00000458748 420 ntBASIC20.07■□□□□ 0.8
SCG2P13521 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SCG2P13521 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.07■□□□□ 0.8
SCG2P13521 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SCG2P13521 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.07■□□□□ 0.8
SCG2P13521 TP73-AS1-207ENST00000624167 988 ntBASIC20.07■□□□□ 0.8
SCG2P13521 AL022326.1-202ENST00000641533 845 ntBASIC20.07■□□□□ 0.8
SCG2P13521 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCG2P13521 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.07■□□□□ 0.8
SCG2P13521 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCG2P13521 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SCG2P13521 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SCG2P13521 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCG2P13521 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.07■□□□□ 0.8
SCG2P13521 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SCG2P13521 FZD10-202ENST00000539839 3282 ntBASIC20.07■□□□□ 0.8
SCG2P13521 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SCG2P13521 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCG2P13521 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.06■□□□□ 0.8
SCG2P13521 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCG2P13521 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.06■□□□□ 0.8
SCG2P13521 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.06■□□□□ 0.8
SCG2P13521 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCG2P13521 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCG2P13521 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.06■□□□□ 0.8
SCG2P13521 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SCG2P13521 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCG2P13521 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCG2P13521 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCG2P13521 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCG2P13521 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SCG2P13521 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SCG2P13521 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.06■□□□□ 0.8
SCG2P13521 AC009078.2-202ENST00000463353 338 ntBASIC20.06■□□□□ 0.8
SCG2P13521 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.06■□□□□ 0.8
SCG2P13521 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.06■□□□□ 0.8
SCG2P13521 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.06■□□□□ 0.8
SCG2P13521 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.06■□□□□ 0.8
SCG2P13521 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.06■□□□□ 0.8
SCG2P13521 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.06■□□□□ 0.8
SCG2P13521 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SCG2P13521 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.06■□□□□ 0.8
SCG2P13521 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SCG2P13521 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCG2P13521 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCG2P13521 AL645608.8-201ENST00000606034 2086 ntBASIC20.06■□□□□ 0.8
SCG2P13521 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCG2P13521 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCG2P13521 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCG2P13521 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.05■□□□□ 0.8
SCG2P13521 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCG2P13521 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.05■□□□□ 0.8
SCG2P13521 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.05■□□□□ 0.8
SCG2P13521 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCG2P13521 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.05■□□□□ 0.8
SCG2P13521 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCG2P13521 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.05■□□□□ 0.8
SCG2P13521 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.05■□□□□ 0.8
SCG2P13521 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.05■□□□□ 0.8
SCG2P13521 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SCG2P13521 AC104692.2-201ENST00000603054 253 ntBASIC20.05■□□□□ 0.8
SCG2P13521 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SCG2P13521 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCG2P13521 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SCG2P13521 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SCG2P13521 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.05■□□□□ 0.8
SCG2P13521 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCG2P13521 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SCG2P13521 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCG2P13521 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SCG2P13521 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCG2P13521 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCG2P13521 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCG2P13521 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCG2P13521 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms