Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 BX276092.7-203ENST00000637198 1536 ntBASIC17.06■□□□□ 0.32
PCNAP12004 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCNAP12004 REXO1L11P-201ENST00000620964 1927 ntBASIC17.06■□□□□ 0.32
PCNAP12004 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.05■□□□□ 0.32
PCNAP12004 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.05■□□□□ 0.32
PCNAP12004 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 BX276092.5-203ENST00000456199 560 ntBASIC17.05■□□□□ 0.32
PCNAP12004 FAM86EP-206ENST00000510506 987 ntBASIC17.05■□□□□ 0.32
PCNAP12004 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.05■□□□□ 0.32
PCNAP12004 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.05■□□□□ 0.32
PCNAP12004 KRT8P26-201ENST00000534154 1276 ntBASIC17.05■□□□□ 0.32
PCNAP12004 AC090616.6-201ENST00000582640 721 ntBASIC17.05■□□□□ 0.32
PCNAP12004 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.05■□□□□ 0.32
PCNAP12004 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.05■□□□□ 0.32
PCNAP12004 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 HLA-J-201ENST00000462773 1622 ntBASIC17.05■□□□□ 0.32
PCNAP12004 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.05■□□□□ 0.32
PCNAP12004 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.05■□□□□ 0.32
PCNAP12004 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.05■□□□□ 0.32
PCNAP12004 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCNAP12004 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.05■□□□□ 0.32
PCNAP12004 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCNAP12004 AC011676.5-201ENST00000624864 2660 ntBASIC17.04■□□□□ 0.32
PCNAP12004 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.04■□□□□ 0.32
PCNAP12004 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCNAP12004 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCNAP12004 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCNAP12004 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.04■□□□□ 0.32
PCNAP12004 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.04■□□□□ 0.32
PCNAP12004 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.04■□□□□ 0.32
PCNAP12004 LINC01451-201ENST00000623792 534 ntBASIC17.04■□□□□ 0.32
PCNAP12004 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.04■□□□□ 0.32
PCNAP12004 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PCNAP12004 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.04■□□□□ 0.32
PCNAP12004 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.04■□□□□ 0.32
PCNAP12004 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
PCNAP12004 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCNAP12004 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.04■□□□□ 0.32
PCNAP12004 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCNAP12004 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.03■□□□□ 0.32
PCNAP12004 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.03■□□□□ 0.32
PCNAP12004 NKILA-202ENST00000614771 2598 ntBASIC17.03■□□□□ 0.32
PCNAP12004 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCNAP12004 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.03■□□□□ 0.32
PCNAP12004 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PCNAP12004 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCNAP12004 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCNAP12004 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCNAP12004 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCNAP12004 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCNAP12004 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.03■□□□□ 0.32
PCNAP12004 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.03■□□□□ 0.32
PCNAP12004 AC011840.4-201ENST00000578471 627 ntBASIC17.03■□□□□ 0.32
PCNAP12004 AL121672.3-201ENST00000608644 468 ntBASIC17.03■□□□□ 0.32
PCNAP12004 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCNAP12004 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PCNAP12004 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.03■□□□□ 0.32
PCNAP12004 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCNAP12004 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PCNAP12004 AP001094.4-201ENST00000579008 2176 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms