Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SFTPBP07988 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.23■□□□□ 0.03
SFTPBP07988 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 UPK3BP1-201ENST00000428678 509 ntBASIC15.23■□□□□ 0.03
SFTPBP07988 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.23■□□□□ 0.03
SFTPBP07988 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SFTPBP07988 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.23■□□□□ 0.03
SFTPBP07988 AC113404.2-201ENST00000507884 177 ntBASIC15.23■□□□□ 0.03
SFTPBP07988 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.23■□□□□ 0.03
SFTPBP07988 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.23■□□□□ 0.03
SFTPBP07988 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.23■□□□□ 0.03
SFTPBP07988 ZNF444P1-201ENST00000559497 298 ntBASIC15.23■□□□□ 0.03
SFTPBP07988 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.23■□□□□ 0.03
SFTPBP07988 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
SFTPBP07988 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.23■□□□□ 0.03
SFTPBP07988 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SFTPBP07988 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.23■□□□□ 0.03
SFTPBP07988 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SFTPBP07988 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SFTPBP07988 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SFTPBP07988 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
SFTPBP07988 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SFTPBP07988 AC005332.1-201ENST00000577698 1310 ntBASIC15.22■□□□□ 0.03
SFTPBP07988 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.22■□□□□ 0.03
SFTPBP07988 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SFTPBP07988 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.22■□□□□ 0.03
SFTPBP07988 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.22■□□□□ 0.03
SFTPBP07988 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.22■□□□□ 0.03
SFTPBP07988 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.22■□□□□ 0.03
SFTPBP07988 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.22■□□□□ 0.03
SFTPBP07988 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.22■□□□□ 0.03
SFTPBP07988 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.22■□□□□ 0.03
SFTPBP07988 AC079602.3-201ENST00000623931 403 ntBASIC15.22■□□□□ 0.03
SFTPBP07988 AP000550.4-202ENST00000639755 178 ntBASIC15.22■□□□□ 0.03
SFTPBP07988 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SFTPBP07988 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.22■□□□□ 0.03
SFTPBP07988 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.22■□□□□ 0.03
SFTPBP07988 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SFTPBP07988 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.22■□□□□ 0.03
SFTPBP07988 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.22■□□□□ 0.03
SFTPBP07988 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
SFTPBP07988 IER3-202ENST00000376377 1350 ntBASIC15.22■□□□□ 0.03
SFTPBP07988 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SFTPBP07988 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SFTPBP07988 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SFTPBP07988 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.21■□□□□ 0.03
SFTPBP07988 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.21■□□□□ 0.03
SFTPBP07988 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.21■□□□□ 0.03
SFTPBP07988 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.21■□□□□ 0.03
SFTPBP07988 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.21■□□□□ 0.03
SFTPBP07988 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.21■□□□□ 0.03
SFTPBP07988 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.21■□□□□ 0.03
SFTPBP07988 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.21■□□□□ 0.03
SFTPBP07988 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.21■□□□□ 0.03
SFTPBP07988 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms