Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TUBB4AP04350 AC010240.3-201ENST00000607688 395 ntBASIC18.75■□□□□ 0.59
TUBB4AP04350 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TUBB4AP04350 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBB4AP04350 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBB4AP04350 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBB4AP04350 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.75■□□□□ 0.59
TUBB4AP04350 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBB4AP04350 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.75■□□□□ 0.59
TUBB4AP04350 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBB4AP04350 AC092171.3-201ENST00000610122 2651 ntBASIC18.75■□□□□ 0.59
TUBB4AP04350 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
TUBB4AP04350 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TUBB4AP04350 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBB4AP04350 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBB4AP04350 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBB4AP04350 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBB4AP04350 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TUBB4AP04350 KRT8P47-201ENST00000604727 1398 ntBASIC18.74■□□□□ 0.59
TUBB4AP04350 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TUBB4AP04350 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBB4AP04350 MESTP1-201ENST00000404287 994 ntBASIC18.74■□□□□ 0.59
TUBB4AP04350 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBB4AP04350 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.74■□□□□ 0.59
TUBB4AP04350 AC073195.1-201ENST00000607241 877 ntBASIC18.74■□□□□ 0.59
TUBB4AP04350 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.74■□□□□ 0.59
TUBB4AP04350 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TUBB4AP04350 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBB4AP04350 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBB4AP04350 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBB4AP04350 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBB4AP04350 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBB4AP04350 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBB4AP04350 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.73■□□□□ 0.59
TUBB4AP04350 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
TUBB4AP04350 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.73■□□□□ 0.59
TUBB4AP04350 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBB4AP04350 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
TUBB4AP04350 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBB4AP04350 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.73■□□□□ 0.59
TUBB4AP04350 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TUBB4AP04350 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.73■□□□□ 0.59
TUBB4AP04350 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.73■□□□□ 0.59
TUBB4AP04350 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.73■□□□□ 0.59
TUBB4AP04350 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBB4AP04350 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBB4AP04350 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.73■□□□□ 0.59
TUBB4AP04350 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBB4AP04350 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TUBB4AP04350 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TUBB4AP04350 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TUBB4AP04350 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBB4AP04350 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TUBB4AP04350 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBB4AP04350 AC104640.1-201ENST00000562617 2109 ntBASIC18.73■□□□□ 0.59
TUBB4AP04350 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBB4AP04350 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBB4AP04350 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBB4AP04350 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.72■□□□□ 0.59
TUBB4AP04350 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBB4AP04350 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.72■□□□□ 0.59
TUBB4AP04350 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBB4AP04350 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.72■□□□□ 0.59
TUBB4AP04350 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TUBB4AP04350 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.72■□□□□ 0.59
TUBB4AP04350 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBB4AP04350 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.72■□□□□ 0.59
TUBB4AP04350 FER1L4-210ENST00000615531 5998 ntBASIC18.72■□□□□ 0.59
TUBB4AP04350 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBB4AP04350 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.72■□□□□ 0.59
TUBB4AP04350 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBB4AP04350 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.72■□□□□ 0.59
TUBB4AP04350 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBB4AP04350 CR769767.2-201ENST00000622735 460 ntBASIC18.72■□□□□ 0.59
TUBB4AP04350 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.72■□□□□ 0.59
TUBB4AP04350 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBB4AP04350 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBB4AP04350 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBB4AP04350 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TUBB4AP04350 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBB4AP04350 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBB4AP04350 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.72■□□□□ 0.59
TUBB4AP04350 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TUBB4AP04350 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBB4AP04350 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms