Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CD4P01730 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.22■□□□□ 0.67
CD4P01730 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD4P01730 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD4P01730 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.22■□□□□ 0.67
CD4P01730 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD4P01730 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CD4P01730 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD4P01730 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CD4P01730 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CD4P01730 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CD4P01730 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.21■□□□□ 0.67
CD4P01730 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD4P01730 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CD4P01730 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD4P01730 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CD4P01730 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD4P01730 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.21■□□□□ 0.67
CD4P01730 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CD4P01730 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CD4P01730 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.21■□□□□ 0.67
CD4P01730 CXCL1P1-201ENST00000502804 216 ntBASIC19.21■□□□□ 0.67
CD4P01730 AC109322.1-201ENST00000524499 1264 ntBASIC19.21■□□□□ 0.67
CD4P01730 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD4P01730 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CD4P01730 AC022145.2-201ENST00000598203 171 ntBASIC19.21■□□□□ 0.67
CD4P01730 AC068137.2-201ENST00000605408 478 ntBASIC19.21■□□□□ 0.67
CD4P01730 AC116407.2-201ENST00000613639 860 ntBASIC19.21■□□□□ 0.67
CD4P01730 REXO1L3P-201ENST00000622202 1288 ntBASIC19.21■□□□□ 0.67
CD4P01730 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.21■□□□□ 0.67
CD4P01730 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CD4P01730 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CD4P01730 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.21■□□□□ 0.67
CD4P01730 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.21■□□□□ 0.67
CD4P01730 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.21■□□□□ 0.67
CD4P01730 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CD4P01730 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CD4P01730 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.21■□□□□ 0.67
CD4P01730 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD4P01730 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CD4P01730 FLJ13224-201ENST00000313737 1514 ntBASIC19.2■□□□□ 0.66
CD4P01730 BX276092.7-203ENST00000637198 1536 ntBASIC19.2■□□□□ 0.66
CD4P01730 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD4P01730 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD4P01730 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD4P01730 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CD4P01730 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CD4P01730 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD4P01730 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD4P01730 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CD4P01730 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD4P01730 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CD4P01730 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.2■□□□□ 0.66
CD4P01730 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD4P01730 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.2■□□□□ 0.66
CD4P01730 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.2■□□□□ 0.66
CD4P01730 IGHV3-52-201ENST00000519770 353 ntBASIC19.2■□□□□ 0.66
CD4P01730 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.2■□□□□ 0.66
CD4P01730 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CD4P01730 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.2■□□□□ 0.66
CD4P01730 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CD4P01730 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD4P01730 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.2■□□□□ 0.66
CD4P01730 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD4P01730 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.2■□□□□ 0.66
CD4P01730 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CD4P01730 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD4P01730 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.2■□□□□ 0.66
CD4P01730 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.2■□□□□ 0.66
CD4P01730 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD4P01730 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.2■□□□□ 0.66
CD4P01730 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CD4P01730 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CD4P01730 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD4P01730 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD4P01730 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD4P01730 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD4P01730 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CD4P01730 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD4P01730 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD4P01730 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD4P01730 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.19■□□□□ 0.66
CD4P01730 BICD1-207ENST00000551848 1962 ntBASIC19.19■□□□□ 0.66
CD4P01730 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CD4P01730 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD4P01730 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD4P01730 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.19■□□□□ 0.66
CD4P01730 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD4P01730 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CD4P01730 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD4P01730 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.19■□□□□ 0.66
CD4P01730 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.19■□□□□ 0.66
CD4P01730 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.19■□□□□ 0.66
CD4P01730 PAWRP1-201ENST00000451083 565 ntBASIC19.19■□□□□ 0.66
CD4P01730 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.19■□□□□ 0.66
CD4P01730 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.19■□□□□ 0.66
CD4P01730 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD4P01730 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD4P01730 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.19■□□□□ 0.66
CD4P01730 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms