Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC7.7□□□□□ -1.18
USH2AO75445 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
USH2AO75445 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC7.7□□□□□ -1.18
USH2AO75445 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC7.7□□□□□ -1.18
USH2AO75445 NKG7-205ENST00000600427 520 ntTSL 3 BASIC7.7□□□□□ -1.18
USH2AO75445 AL590560.3-201ENST00000623350 461 ntBASIC7.7□□□□□ -1.18
USH2AO75445 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
USH2AO75445 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 AKAP8P1-201ENST00000434743 1349 ntBASIC7.7□□□□□ -1.18
USH2AO75445 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC7.7□□□□□ -1.18
USH2AO75445 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC7.7□□□□□ -1.18
USH2AO75445 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC7.7□□□□□ -1.18
USH2AO75445 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC7.7□□□□□ -1.18
USH2AO75445 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC7.7□□□□□ -1.18
USH2AO75445 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
USH2AO75445 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 LBH-202ENST00000401506 485 ntTSL 3 BASIC7.69□□□□□ -1.18
USH2AO75445 AC140658.5-201ENST00000438532 169 ntBASIC7.69□□□□□ -1.18
USH2AO75445 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC7.69□□□□□ -1.18
USH2AO75445 TTTY23B-201ENST00000442790 549 ntBASIC7.69□□□□□ -1.18
USH2AO75445 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC7.69□□□□□ -1.18
USH2AO75445 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 CTBP2P3-201ENST00000585629 1255 ntBASIC7.69□□□□□ -1.18
USH2AO75445 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC7.69□□□□□ -1.18
USH2AO75445 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 KRT8P44-201ENST00000441609 1350 ntBASIC7.69□□□□□ -1.18
USH2AO75445 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
USH2AO75445 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
USH2AO75445 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC7.69□□□□□ -1.18
USH2AO75445 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC7.69□□□□□ -1.18
USH2AO75445 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
USH2AO75445 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC7.69□□□□□ -1.18
USH2AO75445 GGCT-203ENST00000409144 836 ntTSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC7.69□□□□□ -1.18
USH2AO75445 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC7.69□□□□□ -1.18
USH2AO75445 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC7.69□□□□□ -1.18
USH2AO75445 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
USH2AO75445 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
USH2AO75445 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC7.69□□□□□ -1.18
USH2AO75445 LDHBP1-201ENST00000455730 1119 ntBASIC7.69□□□□□ -1.18
USH2AO75445 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms