Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPNE3O75131 AL096828.2-201ENST00000567259 1965 ntBASIC16.8■□□□□ 0.28
CPNE3O75131 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE3O75131 AC008894.3-201ENST00000624324 3103 ntBASIC16.8■□□□□ 0.28
CPNE3O75131 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE3O75131 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
CPNE3O75131 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE3O75131 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE3O75131 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE3O75131 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE3O75131 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.79■□□□□ 0.28
CPNE3O75131 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE3O75131 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CPNE3O75131 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.79■□□□□ 0.28
CPNE3O75131 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CPNE3O75131 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE3O75131 AC103564.2-201ENST00000432853 1299 ntBASIC16.79■□□□□ 0.28
CPNE3O75131 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.79■□□□□ 0.28
CPNE3O75131 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.79■□□□□ 0.28
CPNE3O75131 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CPNE3O75131 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE3O75131 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 NKAPP1-205ENST00000585790 367 ntBASIC16.79■□□□□ 0.28
CPNE3O75131 AC025062.2-201ENST00000605477 670 ntBASIC16.79■□□□□ 0.28
CPNE3O75131 AC116407.3-201ENST00000623905 1129 ntBASIC16.79■□□□□ 0.28
CPNE3O75131 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE3O75131 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CPNE3O75131 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE3O75131 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CPNE3O75131 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
CPNE3O75131 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CPNE3O75131 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE3O75131 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE3O75131 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CPNE3O75131 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.78■□□□□ 0.28
CPNE3O75131 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 AL354751.1-201ENST00000412768 1863 ntBASIC16.78■□□□□ 0.28
CPNE3O75131 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.78■□□□□ 0.28
CPNE3O75131 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CPNE3O75131 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CPNE3O75131 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.78■□□□□ 0.28
CPNE3O75131 MIR574-201ENST00000385209 96 ntBASIC16.78■□□□□ 0.28
CPNE3O75131 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CPNE3O75131 KRT18P58-201ENST00000527480 1120 ntBASIC16.78■□□□□ 0.28
CPNE3O75131 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CPNE3O75131 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE3O75131 AC106730.1-201ENST00000566722 1090 ntBASIC16.78■□□□□ 0.28
CPNE3O75131 MTDHP4-201ENST00000600287 670 ntBASIC16.78■□□□□ 0.28
CPNE3O75131 AL671883.3-201ENST00000603274 991 ntBASIC16.78■□□□□ 0.28
CPNE3O75131 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CPNE3O75131 AC117500.6-201ENST00000624871 588 ntBASIC16.78■□□□□ 0.28
CPNE3O75131 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE3O75131 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CPNE3O75131 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CPNE3O75131 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE3O75131 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE3O75131 ZNF259P1-201ENST00000407656 1365 ntBASIC16.77■□□□□ 0.28
CPNE3O75131 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE3O75131 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CPNE3O75131 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE3O75131 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.77■□□□□ 0.28
CPNE3O75131 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE3O75131 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE3O75131 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.77■□□□□ 0.28
CPNE3O75131 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms