Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLIC4Q9Y696 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CLIC4Q9Y696 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.96■□□□□ 0.79
CLIC4Q9Y696 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CLIC4Q9Y696 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CLIC4Q9Y696 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.96■□□□□ 0.79
CLIC4Q9Y696 AC116407.4-201ENST00000623319 1061 ntBASIC19.96■□□□□ 0.79
CLIC4Q9Y696 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CLIC4Q9Y696 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLIC4Q9Y696 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.96■□□□□ 0.79
CLIC4Q9Y696 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.96■□□□□ 0.79
CLIC4Q9Y696 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLIC4Q9Y696 AC093525.9-201ENST00000624961 1746 ntBASIC19.96■□□□□ 0.79
CLIC4Q9Y696 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CLIC4Q9Y696 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLIC4Q9Y696 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLIC4Q9Y696 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 CHCHD2P8-201ENST00000429873 447 ntBASIC19.95■□□□□ 0.78
CLIC4Q9Y696 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 AL121672.3-201ENST00000608644 468 ntBASIC19.95■□□□□ 0.78
CLIC4Q9Y696 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.95■□□□□ 0.78
CLIC4Q9Y696 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 FAM210CP-201ENST00000445714 574 ntBASIC19.94■□□□□ 0.78
CLIC4Q9Y696 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.94■□□□□ 0.78
CLIC4Q9Y696 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 LINC02012-201ENST00000608206 1725 ntBASIC19.93■□□□□ 0.78
CLIC4Q9Y696 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 MYCLP1-201ENST00000372451 1075 ntBASIC19.93■□□□□ 0.78
CLIC4Q9Y696 FAM220CP-201ENST00000395253 831 ntBASIC19.93■□□□□ 0.78
CLIC4Q9Y696 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 AC246785.2-201ENST00000432512 513 ntBASIC19.93■□□□□ 0.78
CLIC4Q9Y696 AP002383.4-201ENST00000442518 975 ntBASIC19.93■□□□□ 0.78
CLIC4Q9Y696 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms