Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 RNPS1P1-201ENST00000507437 918 ntBASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 AL138831.2-201ENST00000606564 490 ntBASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB1Q9Y5F3 AC010460.3-201ENST00000511359 1579 ntBASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 AC018712.1-201ENST00000455767 687 ntBASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 AC002558.1-201ENST00000488906 803 ntBASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 TERC-201ENST00000602385 541 ntBASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHB1Q9Y5F3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 AC007967.3-201ENST00000434308 558 ntBASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 AC005336.2-201ENST00000593183 939 ntBASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms