Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 AC046185.3-201ENST00000623228 1824 ntBASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 DOC2GP-204ENST00000639052 2548 ntBASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 GCSHP5-201ENST00000443090 522 ntBASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 AC024563.2-201ENST00000603282 481 ntBASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 AL139327.4-201ENST00000612362 153 ntBASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 AL603756.1-201ENST00000606511 2163 ntBASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.2□□□□□ -0.46
UBE2D4Q9Y2X8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 AL356309.3-201ENST00000624132 1934 ntBASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 INGX-201ENST00000359239 846 ntBASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 AP000523.1-201ENST00000398242 1049 ntBASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 AC009154.2-201ENST00000621177 724 ntBASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms