Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 AC002056.1-201ENST00000395613 760 ntBASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 AC092474.2-201ENST00000424288 719 ntBASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 RN7SL589P-201ENST00000481268 310 ntBASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 DUX4L17-201ENST00000557360 1267 ntBASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 AC005412.3-201ENST00000580309 715 ntBASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC25.72■■□□□ 1.71
SHANK2Q9UPX8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 AC015911.4-201ENST00000588022 1070 ntBASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
SHANK2Q9UPX8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SHANK2Q9UPX8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.71
SHANK2Q9UPX8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC25.7■■□□□ 1.71
SHANK2Q9UPX8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SHANK2Q9UPX8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SHANK2Q9UPX8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SHANK2Q9UPX8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SHANK2Q9UPX8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SHANK2Q9UPX8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SHANK2Q9UPX8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC25.7■■□□□ 1.7
SHANK2Q9UPX8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
SHANK2Q9UPX8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC25.7■■□□□ 1.7
SHANK2Q9UPX8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC25.7■■□□□ 1.7
SHANK2Q9UPX8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
SHANK2Q9UPX8 AL035252.4-201ENST00000624174 288 ntBASIC25.7■■□□□ 1.7
SHANK2Q9UPX8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SHANK2Q9UPX8 EGFEM1P-202ENST00000431685 1563 ntBASIC25.7■■□□□ 1.7
SHANK2Q9UPX8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC25.7■■□□□ 1.7
SHANK2Q9UPX8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC25.69■■□□□ 1.7
SHANK2Q9UPX8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
SHANK2Q9UPX8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
SHANK2Q9UPX8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SHANK2Q9UPX8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SHANK2Q9UPX8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SHANK2Q9UPX8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC25.68■■□□□ 1.7
SHANK2Q9UPX8 AC093512.1-201ENST00000617969 520 ntBASIC25.68■■□□□ 1.7
SHANK2Q9UPX8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC25.68■■□□□ 1.7
SHANK2Q9UPX8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
SHANK2Q9UPX8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SHANK2Q9UPX8 AC135050.7-201ENST00000624508 2218 ntBASIC25.68■■□□□ 1.7
SHANK2Q9UPX8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SHANK2Q9UPX8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SHANK2Q9UPX8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms