Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 AL138688.1-201ENST00000624851 1594 ntBASIC20■□□□□ 0.79
SYNPO2Q9UMS6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 SLC25A6P2-201ENST00000497974 877 ntBASIC20■□□□□ 0.79
SYNPO2Q9UMS6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 AL513190.1-201ENST00000621254 727 ntBASIC20■□□□□ 0.79
SYNPO2Q9UMS6 AC004877.2-201ENST00000623941 599 ntBASIC20■□□□□ 0.79
SYNPO2Q9UMS6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SYNPO2Q9UMS6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 AP006288.1-201ENST00000446065 395 ntBASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 AC005829.1-201ENST00000570002 483 ntBASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 AC055717.3-201ENST00000622967 595 ntBASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.99■□□□□ 0.79
SYNPO2Q9UMS6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 AC004967.1-201ENST00000453589 447 ntBASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 ACTL9-202ENST00000612068 1252 ntBASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 AC079781.4-201ENST00000641908 219 ntBASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPO2Q9UMS6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms