Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 CNN2P11-201ENST00000429351 262 ntBASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 AL031432.2-201ENST00000566714 459 ntBASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 AL928711.1-201ENST00000570165 459 ntBASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3BQ9UBC3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
DNMT3BQ9UBC3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 AC025580.3-201ENST00000617932 1424 ntBASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 PI4KAP1-204ENST00000612579 1703 ntBASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 KRT18P55-202ENST00000578578 1546 ntBASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 AL590787.1-201ENST00000568856 1315 ntBASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 AC138028.4-201ENST00000564984 1845 ntBASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3BQ9UBC3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 AC074386.1-202ENST00000463561 864 ntBASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3BQ9UBC3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms