Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.32■□□□□ 0.2
RLIMQ9NVW2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 KRT18P21-201ENST00000515767 1272 ntBASIC16.31■□□□□ 0.2
RLIMQ9NVW2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 AC060834.1-201ENST00000443027 2032 ntBASIC16.31■□□□□ 0.2
RLIMQ9NVW2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RLIMQ9NVW2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 AL645929.1-201ENST00000420084 975 ntBASIC16.3■□□□□ 0.2
RLIMQ9NVW2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 PKD1P1-201ENST00000458669 6805 ntBASIC16.3■□□□□ 0.2
RLIMQ9NVW2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RLIMQ9NVW2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 BX276092.7-203ENST00000637198 1536 ntBASIC16.29■□□□□ 0.2
RLIMQ9NVW2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms