Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.02■□□□□ 0.95
SALL1Q9NSC2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 CRYGEP-201ENST00000412192 528 ntBASIC21.01■□□□□ 0.95
SALL1Q9NSC2 DNAJB3-201ENST00000446806 729 ntBASIC21.01■□□□□ 0.95
SALL1Q9NSC2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 AC004790.2-201ENST00000623588 572 ntBASIC21.01■□□□□ 0.95
SALL1Q9NSC2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SALL1Q9NSC2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
SALL1Q9NSC2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SALL1Q9NSC2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SALL1Q9NSC2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SALL1Q9NSC2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SALL1Q9NSC2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SALL1Q9NSC2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
SALL1Q9NSC2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21■□□□□ 0.95
SALL1Q9NSC2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21■□□□□ 0.95
SALL1Q9NSC2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21■□□□□ 0.95
SALL1Q9NSC2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SALL1Q9NSC2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SALL1Q9NSC2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21■□□□□ 0.95
SALL1Q9NSC2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21■□□□□ 0.95
SALL1Q9NSC2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21■□□□□ 0.95
SALL1Q9NSC2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21■□□□□ 0.95
SALL1Q9NSC2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21■□□□□ 0.95
SALL1Q9NSC2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21■□□□□ 0.95
SALL1Q9NSC2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SALL1Q9NSC2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SALL1Q9NSC2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SALL1Q9NSC2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21■□□□□ 0.95
SALL1Q9NSC2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21■□□□□ 0.95
SALL1Q9NSC2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SALL1Q9NSC2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21■□□□□ 0.95
SALL1Q9NSC2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SALL1Q9NSC2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21■□□□□ 0.95
SALL1Q9NSC2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21■□□□□ 0.95
SALL1Q9NSC2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21■□□□□ 0.95
SALL1Q9NSC2 AC010654.1-201ENST00000615722 808 ntBASIC21■□□□□ 0.95
SALL1Q9NSC2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21■□□□□ 0.95
SALL1Q9NSC2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21■□□□□ 0.95
SALL1Q9NSC2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 AC046185.3-201ENST00000623228 1824 ntBASIC20.99■□□□□ 0.95
SALL1Q9NSC2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 MIR4751-201ENST00000578027 74 ntBASIC20.99■□□□□ 0.95
SALL1Q9NSC2 AL139327.4-201ENST00000612362 153 ntBASIC20.99■□□□□ 0.95
SALL1Q9NSC2 GGTLC5P-201ENST00000617623 998 ntBASIC20.99■□□□□ 0.95
SALL1Q9NSC2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
SALL1Q9NSC2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 AL590787.1-201ENST00000568856 1315 ntBASIC20.98■□□□□ 0.95
SALL1Q9NSC2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms