Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC063952.2-201ENST00000498792 1227 ntBASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 AC083849.1-201ENST00000615227 514 ntBASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LRTM1Q9HBL6 AC084018.2-201ENST00000613093 2607 ntBASIC16.83■□□□□ 0.29
LRTM1Q9HBL6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.83■□□□□ 0.29
LRTM1Q9HBL6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
LRTM1Q9HBL6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 RCN1P1-201ENST00000400413 996 ntBASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 GUSBP12-201ENST00000513727 720 ntBASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM1Q9HBL6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 AL671277.2-201ENST00000458060 996 ntBASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRTM1Q9HBL6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 MYCLP1-201ENST00000372451 1075 ntBASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 AL645929.1-201ENST00000420084 975 ntBASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 AC022616.7-201ENST00000525383 220 ntBASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms