Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
VGLL1Q99990 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.3□□□□□ -0.28
VGLL1Q99990 MMP23A-201ENST00000234610 1017 ntBASIC13.3□□□□□ -0.28
VGLL1Q99990 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.3□□□□□ -0.28
VGLL1Q99990 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
VGLL1Q99990 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.3□□□□□ -0.28
VGLL1Q99990 AP000523.1-201ENST00000398242 1049 ntBASIC13.3□□□□□ -0.28
VGLL1Q99990 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 ECEL1P3-201ENST00000427961 737 ntBASIC13.3□□□□□ -0.28
VGLL1Q99990 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.3□□□□□ -0.28
VGLL1Q99990 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.3□□□□□ -0.28
VGLL1Q99990 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.3□□□□□ -0.28
VGLL1Q99990 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.3□□□□□ -0.28
VGLL1Q99990 MIR4497-201ENST00000583208 89 ntBASIC13.3□□□□□ -0.28
VGLL1Q99990 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.3□□□□□ -0.28
VGLL1Q99990 AC024563.2-201ENST00000603282 481 ntBASIC13.3□□□□□ -0.28
VGLL1Q99990 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.3□□□□□ -0.28
VGLL1Q99990 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
VGLL1Q99990 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.3□□□□□ -0.28
VGLL1Q99990 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
VGLL1Q99990 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.3□□□□□ -0.28
VGLL1Q99990 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
VGLL1Q99990 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
VGLL1Q99990 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.29□□□□□ -0.28
VGLL1Q99990 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 AC106886.4-201ENST00000623557 2502 ntBASIC13.29□□□□□ -0.28
VGLL1Q99990 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.29□□□□□ -0.28
VGLL1Q99990 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
VGLL1Q99990 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.29□□□□□ -0.28
VGLL1Q99990 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.29□□□□□ -0.28
VGLL1Q99990 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.29□□□□□ -0.28
VGLL1Q99990 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.29□□□□□ -0.28
VGLL1Q99990 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.29□□□□□ -0.28
VGLL1Q99990 GCSHP2-201ENST00000560971 527 ntBASIC13.29□□□□□ -0.28
VGLL1Q99990 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.29□□□□□ -0.28
VGLL1Q99990 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
VGLL1Q99990 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.29□□□□□ -0.28
VGLL1Q99990 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
VGLL1Q99990 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VGLL1Q99990 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.29□□□□□ -0.28
VGLL1Q99990 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
VGLL1Q99990 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.29□□□□□ -0.28
VGLL1Q99990 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
VGLL1Q99990 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
VGLL1Q99990 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
VGLL1Q99990 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.28□□□□□ -0.28
VGLL1Q99990 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.28□□□□□ -0.28
VGLL1Q99990 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.28□□□□□ -0.28
VGLL1Q99990 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.28□□□□□ -0.28
VGLL1Q99990 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.28□□□□□ -0.28
VGLL1Q99990 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.28□□□□□ -0.28
VGLL1Q99990 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
VGLL1Q99990 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms