Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE1Q99829 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.5■□□□□ 0.39
CPNE1Q99829 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE1Q99829 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE1Q99829 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.5■□□□□ 0.39
CPNE1Q99829 AC006011.2-201ENST00000621313 1158 ntBASIC17.5■□□□□ 0.39
CPNE1Q99829 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE1Q99829 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE1Q99829 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE1Q99829 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CPNE1Q99829 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CPNE1Q99829 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CPNE1Q99829 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
CPNE1Q99829 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE1Q99829 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE1Q99829 AC093525.9-201ENST00000624961 1746 ntBASIC17.5■□□□□ 0.39
CPNE1Q99829 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CPNE1Q99829 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CPNE1Q99829 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 AC046185.3-201ENST00000623228 1824 ntBASIC17.49■□□□□ 0.39
CPNE1Q99829 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CPNE1Q99829 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.49■□□□□ 0.39
CPNE1Q99829 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CPNE1Q99829 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.49■□□□□ 0.39
CPNE1Q99829 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 SLC25A1P3-201ENST00000395415 828 ntBASIC17.49■□□□□ 0.39
CPNE1Q99829 KRT18P57-201ENST00000443599 1254 ntBASIC17.49■□□□□ 0.39
CPNE1Q99829 AC092647.4-201ENST00000457211 535 ntBASIC17.49■□□□□ 0.39
CPNE1Q99829 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.49■□□□□ 0.39
CPNE1Q99829 IGHV3-52-201ENST00000519770 353 ntBASIC17.49■□□□□ 0.39
CPNE1Q99829 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CPNE1Q99829 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE1Q99829 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE1Q99829 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CPNE1Q99829 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE1Q99829 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
CPNE1Q99829 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE1Q99829 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CPNE1Q99829 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE1Q99829 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE1Q99829 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE1Q99829 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE1Q99829 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE1Q99829 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE1Q99829 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CPNE1Q99829 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE1Q99829 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE1Q99829 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE1Q99829 AC007967.3-201ENST00000434308 558 ntBASIC17.48■□□□□ 0.39
CPNE1Q99829 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE1Q99829 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.48■□□□□ 0.39
CPNE1Q99829 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.48■□□□□ 0.39
CPNE1Q99829 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.48■□□□□ 0.39
CPNE1Q99829 AC019129.2-201ENST00000609837 1235 ntBASIC17.48■□□□□ 0.39
CPNE1Q99829 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CPNE1Q99829 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CPNE1Q99829 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE1Q99829 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE1Q99829 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE1Q99829 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE1Q99829 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CPNE1Q99829 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE1Q99829 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE1Q99829 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE1Q99829 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE1Q99829 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE1Q99829 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE1Q99829 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CPNE1Q99829 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms