Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 MRPL3P1-201ENST00000400109 1033 ntBASIC18.03■□□□□ 0.48
RPRD1AQ96P16 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 KRT18P67-201ENST00000432816 1264 ntBASIC18.03■□□□□ 0.48
RPRD1AQ96P16 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 RNPS1P1-201ENST00000507437 918 ntBASIC18.03■□□□□ 0.48
RPRD1AQ96P16 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 AC021087.4-201ENST00000563761 564 ntBASIC18.03■□□□□ 0.48
RPRD1AQ96P16 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 AC064862.7-201ENST00000604520 867 ntBASIC18.03■□□□□ 0.48
RPRD1AQ96P16 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 MTDHP4-201ENST00000600287 670 ntBASIC18.02■□□□□ 0.48
RPRD1AQ96P16 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 AC009336.1-201ENST00000608941 1553 ntBASIC18.02■□□□□ 0.48
RPRD1AQ96P16 AL022326.1-202ENST00000641533 845 ntBASIC18.02■□□□□ 0.48
RPRD1AQ96P16 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPRD1AQ96P16 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RPRD1AQ96P16 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RPRD1AQ96P16 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.02■□□□□ 0.47
RPRD1AQ96P16 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RPRD1AQ96P16 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RPRD1AQ96P16 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.47
RPRD1AQ96P16 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.02■□□□□ 0.47
RPRD1AQ96P16 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
RPRD1AQ96P16 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RPRD1AQ96P16 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RPRD1AQ96P16 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.02■□□□□ 0.47
RPRD1AQ96P16 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 SIGLEC30P-201ENST00000455569 941 ntBASIC18.01■□□□□ 0.47
RPRD1AQ96P16 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 AL662844.1-201ENST00000546340 181 ntBASIC18.01■□□□□ 0.47
RPRD1AQ96P16 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 SLC25A6P4-201ENST00000586535 553 ntBASIC18.01■□□□□ 0.47
RPRD1AQ96P16 AL139327.4-201ENST00000612362 153 ntBASIC18.01■□□□□ 0.47
RPRD1AQ96P16 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms