Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 TSPY13P-201ENST00000338964 914 ntBASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 AC105265.2-201ENST00000467189 838 ntBASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 AL356652.1-201ENST00000615962 565 ntBASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 LYSMD4-203ENST00000378904 2122 ntBASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 NTF6A-201ENST00000591175 560 ntBASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 AL356740.2-201ENST00000601559 647 ntBASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 AC011298.3-201ENST00000615796 283 ntBASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 MYC-208ENST00000641036 567 ntBASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 AC083906.6-201ENST00000641366 219 ntBASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 CICP20-201ENST00000443330 2801 ntBASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms