Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 SLC25A6P5-201ENST00000435663 894 ntBASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 AC112698.1-201ENST00000510299 916 ntBASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 AC009154.2-201ENST00000621177 724 ntBASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 AC022898.2-201ENST00000616822 1312 ntBASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 MIR574-201ENST00000385209 96 ntBASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC33Q8N5R6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 MTCL1P1-201ENST00000446207 792 ntBASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 RNPS1P1-201ENST00000507437 918 ntBASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 MTDHP3-201ENST00000594186 672 ntBASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 AL049840.3-201ENST00000602669 611 ntBASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC33Q8N5R6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms