Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC093214.1-201ENST00000511688 1107 ntBASIC17.87■□□□□ 0.45
SIX5Q8N196 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SIX5Q8N196 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.87■□□□□ 0.45
SIX5Q8N196 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
SIX5Q8N196 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.87■□□□□ 0.45
SIX5Q8N196 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.87■□□□□ 0.45
SIX5Q8N196 AC068137.2-201ENST00000605408 478 ntBASIC17.87■□□□□ 0.45
SIX5Q8N196 AJ011932.1-201ENST00000621707 465 ntBASIC17.87■□□□□ 0.45
SIX5Q8N196 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SIX5Q8N196 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SIX5Q8N196 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SIX5Q8N196 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.86■□□□□ 0.45
SIX5Q8N196 ESPNP-201ENST00000270691 2015 ntBASIC17.86■□□□□ 0.45
SIX5Q8N196 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.86■□□□□ 0.45
SIX5Q8N196 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.86■□□□□ 0.45
SIX5Q8N196 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.86■□□□□ 0.45
SIX5Q8N196 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.86■□□□□ 0.45
SIX5Q8N196 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.86■□□□□ 0.45
SIX5Q8N196 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.86■□□□□ 0.45
SIX5Q8N196 AC063926.2-201ENST00000623766 1308 ntBASIC17.86■□□□□ 0.45
SIX5Q8N196 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.86■□□□□ 0.45
SIX5Q8N196 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
SIX5Q8N196 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.86■□□□□ 0.45
SIX5Q8N196 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SIX5Q8N196 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SIX5Q8N196 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.86■□□□□ 0.45
SIX5Q8N196 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.86■□□□□ 0.45
SIX5Q8N196 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.86■□□□□ 0.45
SIX5Q8N196 AC097637.2-201ENST00000624096 1997 ntBASIC17.86■□□□□ 0.45
SIX5Q8N196 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX5Q8N196 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIX5Q8N196 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SIX5Q8N196 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SIX5Q8N196 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIX5Q8N196 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SIX5Q8N196 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIX5Q8N196 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIX5Q8N196 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.85■□□□□ 0.45
SIX5Q8N196 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.85■□□□□ 0.45
SIX5Q8N196 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.85■□□□□ 0.45
SIX5Q8N196 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.85■□□□□ 0.45
SIX5Q8N196 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SIX5Q8N196 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.85■□□□□ 0.45
SIX5Q8N196 AL121761.2-201ENST00000598007 1648 ntBASIC17.85■□□□□ 0.45
SIX5Q8N196 AL390955.2-201ENST00000603032 514 ntBASIC17.85■□□□□ 0.45
SIX5Q8N196 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIX5Q8N196 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.85■□□□□ 0.45
SIX5Q8N196 Z92544.3-201ENST00000624747 417 ntBASIC17.85■□□□□ 0.45
SIX5Q8N196 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.85■□□□□ 0.45
SIX5Q8N196 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIX5Q8N196 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIX5Q8N196 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
SIX5Q8N196 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 NOC2LP1-202ENST00000452600 2235 ntBASIC17.84■□□□□ 0.45
SIX5Q8N196 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.84■□□□□ 0.45
SIX5Q8N196 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.84■□□□□ 0.45
SIX5Q8N196 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.84■□□□□ 0.45
SIX5Q8N196 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.84■□□□□ 0.45
SIX5Q8N196 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.84■□□□□ 0.45
SIX5Q8N196 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.84■□□□□ 0.45
SIX5Q8N196 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SIX5Q8N196 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.84■□□□□ 0.45
SIX5Q8N196 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SIX5Q8N196 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms