Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC170Q8IYT3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 AC018695.7-201ENST00000624587 2492 ntBASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 COX5BP2-201ENST00000392354 334 ntBASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 AL031432.5-201ENST00000641059 760 ntBASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC170Q8IYT3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 MYCLP1-201ENST00000372451 1075 ntBASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 AC140113.3-201ENST00000605663 199 ntBASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 AL023973.1-201ENST00000624619 620 ntBASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms