Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT39Q6A163 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.89■□□□□ 0.61
KRT39Q6A163 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.89■□□□□ 0.61
KRT39Q6A163 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT39Q6A163 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
KRT39Q6A163 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT39Q6A163 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
KRT39Q6A163 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT39Q6A163 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT39Q6A163 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT39Q6A163 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT39Q6A163 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
KRT39Q6A163 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT39Q6A163 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT39Q6A163 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT39Q6A163 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
KRT39Q6A163 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT39Q6A163 AC009336.1-201ENST00000608941 1553 ntBASIC18.89■□□□□ 0.61
KRT39Q6A163 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT39Q6A163 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT39Q6A163 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT39Q6A163 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.88■□□□□ 0.61
KRT39Q6A163 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT39Q6A163 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.88■□□□□ 0.61
KRT39Q6A163 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT39Q6A163 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT39Q6A163 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT39Q6A163 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT39Q6A163 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT39Q6A163 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT39Q6A163 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT39Q6A163 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
KRT39Q6A163 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT39Q6A163 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
KRT39Q6A163 ABCD1P5-201ENST00000445663 754 ntBASIC18.88■□□□□ 0.61
KRT39Q6A163 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
KRT39Q6A163 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.88■□□□□ 0.61
KRT39Q6A163 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT39Q6A163 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT39Q6A163 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
KRT39Q6A163 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT39Q6A163 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
KRT39Q6A163 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT39Q6A163 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT39Q6A163 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
KRT39Q6A163 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT39Q6A163 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT39Q6A163 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT39Q6A163 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT39Q6A163 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
KRT39Q6A163 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT39Q6A163 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
KRT39Q6A163 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.87■□□□□ 0.61
KRT39Q6A163 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT39Q6A163 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT39Q6A163 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.87■□□□□ 0.61
KRT39Q6A163 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.87■□□□□ 0.61
KRT39Q6A163 KLF4P1-201ENST00000412782 1185 ntBASIC18.87■□□□□ 0.61
KRT39Q6A163 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT39Q6A163 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
KRT39Q6A163 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.87■□□□□ 0.61
KRT39Q6A163 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
KRT39Q6A163 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.87■□□□□ 0.61
KRT39Q6A163 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.87■□□□□ 0.61
KRT39Q6A163 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.87■□□□□ 0.61
KRT39Q6A163 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.87■□□□□ 0.61
KRT39Q6A163 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
KRT39Q6A163 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.87■□□□□ 0.61
KRT39Q6A163 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.87■□□□□ 0.61
KRT39Q6A163 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT39Q6A163 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT39Q6A163 AL121772.3-201ENST00000610840 674 ntBASIC18.87■□□□□ 0.61
KRT39Q6A163 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.87■□□□□ 0.61
KRT39Q6A163 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT39Q6A163 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT39Q6A163 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT39Q6A163 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
KRT39Q6A163 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT39Q6A163 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT39Q6A163 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
KRT39Q6A163 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
KRT39Q6A163 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT39Q6A163 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
KRT39Q6A163 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
KRT39Q6A163 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
KRT39Q6A163 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT39Q6A163 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT39Q6A163 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT39Q6A163 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT39Q6A163 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT39Q6A163 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT39Q6A163 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT39Q6A163 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT39Q6A163 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT39Q6A163 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT39Q6A163 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
KRT39Q6A163 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT39Q6A163 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT39Q6A163 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.86■□□□□ 0.61
KRT39Q6A163 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms