Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALFQ53S48 AC005332.8-201ENST00000622750 2735 ntBASIC17.98■□□□□ 0.47
ALFQ53S48 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALFQ53S48 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ALFQ53S48 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALFQ53S48 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ALFQ53S48 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ALFQ53S48 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.98■□□□□ 0.47
ALFQ53S48 MYCLP1-201ENST00000372451 1075 ntBASIC17.98■□□□□ 0.47
ALFQ53S48 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALFQ53S48 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.98■□□□□ 0.47
ALFQ53S48 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ALFQ53S48 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.98■□□□□ 0.47
ALFQ53S48 AL020989.1-201ENST00000422979 469 ntBASIC17.98■□□□□ 0.47
ALFQ53S48 SCARNA2-201ENST00000458748 420 ntBASIC17.98■□□□□ 0.47
ALFQ53S48 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.98■□□□□ 0.47
ALFQ53S48 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.98■□□□□ 0.47
ALFQ53S48 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALFQ53S48 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
ALFQ53S48 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.98■□□□□ 0.47
ALFQ53S48 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.98■□□□□ 0.47
ALFQ53S48 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ALFQ53S48 AL139327.4-201ENST00000612362 153 ntBASIC17.98■□□□□ 0.47
ALFQ53S48 AC009336.1-201ENST00000608941 1553 ntBASIC17.98■□□□□ 0.47
ALFQ53S48 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALFQ53S48 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALFQ53S48 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALFQ53S48 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.98■□□□□ 0.47
ALFQ53S48 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALFQ53S48 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.98■□□□□ 0.47
ALFQ53S48 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALFQ53S48 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
ALFQ53S48 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.98■□□□□ 0.47
ALFQ53S48 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALFQ53S48 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.98■□□□□ 0.47
ALFQ53S48 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALFQ53S48 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ALFQ53S48 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.97■□□□□ 0.47
ALFQ53S48 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.97■□□□□ 0.47
ALFQ53S48 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
ALFQ53S48 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ALFQ53S48 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.97■□□□□ 0.47
ALFQ53S48 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.97■□□□□ 0.47
ALFQ53S48 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
ALFQ53S48 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ALFQ53S48 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ALFQ53S48 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.97■□□□□ 0.47
ALFQ53S48 SLC25A6P4-201ENST00000586535 553 ntBASIC17.97■□□□□ 0.47
ALFQ53S48 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.97■□□□□ 0.47
ALFQ53S48 LINC00896-202ENST00000609602 2128 ntBASIC17.97■□□□□ 0.47
ALFQ53S48 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALFQ53S48 PKD1P1-201ENST00000458669 6805 ntBASIC17.97■□□□□ 0.47
ALFQ53S48 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.97■□□□□ 0.47
ALFQ53S48 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.97■□□□□ 0.47
ALFQ53S48 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALFQ53S48 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.96■□□□□ 0.47
ALFQ53S48 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALFQ53S48 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
ALFQ53S48 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALFQ53S48 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALFQ53S48 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALFQ53S48 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALFQ53S48 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALFQ53S48 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALFQ53S48 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALFQ53S48 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.96■□□□□ 0.47
ALFQ53S48 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ALFQ53S48 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ALFQ53S48 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ALFQ53S48 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ALFQ53S48 HNRNPDP1-201ENST00000439535 754 ntBASIC17.96■□□□□ 0.47
ALFQ53S48 FDX1P1-201ENST00000449115 551 ntBASIC17.96■□□□□ 0.47
ALFQ53S48 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.96■□□□□ 0.47
ALFQ53S48 AC018712.1-201ENST00000455767 687 ntBASIC17.96■□□□□ 0.47
ALFQ53S48 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ALFQ53S48 RNPS1P1-201ENST00000507437 918 ntBASIC17.96■□□□□ 0.47
ALFQ53S48 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.96■□□□□ 0.47
ALFQ53S48 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.96■□□□□ 0.47
ALFQ53S48 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.96■□□□□ 0.47
ALFQ53S48 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.96■□□□□ 0.47
ALFQ53S48 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.96■□□□□ 0.47
ALFQ53S48 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.96■□□□□ 0.47
ALFQ53S48 AC025062.2-201ENST00000605477 670 ntBASIC17.96■□□□□ 0.47
ALFQ53S48 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms