Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 AC116353.5-201ENST00000638148 1699 ntBASIC16.3■□□□□ 0.2
SYPL1Q16563 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SYPL1Q16563 AL121761.2-201ENST00000598007 1648 ntBASIC16.3■□□□□ 0.2
SYPL1Q16563 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYPL1Q16563 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYPL1Q16563 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYPL1Q16563 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.29■□□□□ 0.2
SYPL1Q16563 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SYPL1Q16563 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.29■□□□□ 0.2
SYPL1Q16563 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.29■□□□□ 0.2
SYPL1Q16563 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.29■□□□□ 0.2
SYPL1Q16563 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.29■□□□□ 0.2
SYPL1Q16563 KRT8P26-201ENST00000534154 1276 ntBASIC16.29■□□□□ 0.2
SYPL1Q16563 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.29■□□□□ 0.2
SYPL1Q16563 AL138831.2-201ENST00000606564 490 ntBASIC16.29■□□□□ 0.2
SYPL1Q16563 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.29■□□□□ 0.2
SYPL1Q16563 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.29■□□□□ 0.2
SYPL1Q16563 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.29■□□□□ 0.2
SYPL1Q16563 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.29■□□□□ 0.2
SYPL1Q16563 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.29■□□□□ 0.2
SYPL1Q16563 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SYPL1Q16563 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SYPL1Q16563 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.29■□□□□ 0.2
SYPL1Q16563 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.29■□□□□ 0.2
SYPL1Q16563 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.29■□□□□ 0.2
SYPL1Q16563 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
SYPL1Q16563 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SYPL1Q16563 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYPL1Q16563 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SYPL1Q16563 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SYPL1Q16563 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 AC060834.1-201ENST00000443027 2032 ntBASIC16.28■□□□□ 0.2
SYPL1Q16563 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SYPL1Q16563 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SYPL1Q16563 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.28■□□□□ 0.2
SYPL1Q16563 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
SYPL1Q16563 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SYPL1Q16563 AC011840.4-201ENST00000578471 627 ntBASIC16.28■□□□□ 0.2
SYPL1Q16563 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SYPL1Q16563 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.28■□□□□ 0.2
SYPL1Q16563 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.28■□□□□ 0.2
SYPL1Q16563 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SYPL1Q16563 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.28■□□□□ 0.2
SYPL1Q16563 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.28■□□□□ 0.2
SYPL1Q16563 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 AC084018.2-201ENST00000613093 2607 ntBASIC16.28■□□□□ 0.2
SYPL1Q16563 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYPL1Q16563 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYPL1Q16563 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.27■□□□□ 0.2
SYPL1Q16563 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.27■□□□□ 0.2
SYPL1Q16563 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYPL1Q16563 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYPL1Q16563 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SYPL1Q16563 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYPL1Q16563 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYPL1Q16563 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.27■□□□□ 0.2
SYPL1Q16563 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.27■□□□□ 0.2
SYPL1Q16563 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYPL1Q16563 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYPL1Q16563 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYPL1Q16563 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.27■□□□□ 0.2
SYPL1Q16563 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYPL1Q16563 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYPL1Q16563 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.27■□□□□ 0.2
SYPL1Q16563 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms