Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATN1P54259 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATN1P54259 AC009949.1-201ENST00000623048 1830 ntBASIC19.19■□□□□ 0.66
ATN1P54259 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATN1P54259 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ATN1P54259 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.19■□□□□ 0.66
ATN1P54259 KRT18P32-201ENST00000424695 1287 ntBASIC19.19■□□□□ 0.66
ATN1P54259 FAM58DP-201ENST00000428076 619 ntBASIC19.19■□□□□ 0.66
ATN1P54259 AC069335.1-201ENST00000489972 472 ntBASIC19.19■□□□□ 0.66
ATN1P54259 AC099522.2-201ENST00000607001 744 ntBASIC19.19■□□□□ 0.66
ATN1P54259 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.19■□□□□ 0.66
ATN1P54259 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATN1P54259 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.19■□□□□ 0.66
ATN1P54259 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATN1P54259 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ATN1P54259 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.19■□□□□ 0.66
ATN1P54259 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.19■□□□□ 0.66
ATN1P54259 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.19■□□□□ 0.66
ATN1P54259 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATN1P54259 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.19■□□□□ 0.66
ATN1P54259 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATN1P54259 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATN1P54259 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATN1P54259 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATN1P54259 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.19■□□□□ 0.66
ATN1P54259 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATN1P54259 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ATN1P54259 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATN1P54259 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
ATN1P54259 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATN1P54259 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATN1P54259 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATN1P54259 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
ATN1P54259 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC19.18■□□□□ 0.66
ATN1P54259 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ATN1P54259 GAPDHP21-201ENST00000450301 1010 ntBASIC19.18■□□□□ 0.66
ATN1P54259 KLF2P3-201ENST00000451977 1087 ntBASIC19.18■□□□□ 0.66
ATN1P54259 AC079140.1-201ENST00000508039 487 ntBASIC19.18■□□□□ 0.66
ATN1P54259 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.18■□□□□ 0.66
ATN1P54259 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.18■□□□□ 0.66
ATN1P54259 AC132872.1-201ENST00000566986 1195 ntBASIC19.18■□□□□ 0.66
ATN1P54259 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.18■□□□□ 0.66
ATN1P54259 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.18■□□□□ 0.66
ATN1P54259 LINC02560-201ENST00000596379 459 ntBASIC19.18■□□□□ 0.66
ATN1P54259 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.18■□□□□ 0.66
ATN1P54259 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.18■□□□□ 0.66
ATN1P54259 BX276092.7-203ENST00000637198 1536 ntBASIC19.18■□□□□ 0.66
ATN1P54259 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATN1P54259 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATN1P54259 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATN1P54259 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATN1P54259 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATN1P54259 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATN1P54259 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.18■□□□□ 0.66
ATN1P54259 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATN1P54259 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.18■□□□□ 0.66
ATN1P54259 FO538757.1-201ENST00000623083 1397 ntBASIC19.18■□□□□ 0.66
ATN1P54259 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATN1P54259 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATN1P54259 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ATN1P54259 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATN1P54259 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATN1P54259 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.17■□□□□ 0.66
ATN1P54259 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATN1P54259 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.17■□□□□ 0.66
ATN1P54259 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATN1P54259 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.17■□□□□ 0.66
ATN1P54259 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATN1P54259 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ATN1P54259 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.17■□□□□ 0.66
ATN1P54259 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.17■□□□□ 0.66
ATN1P54259 PSAT1P2-201ENST00000426107 972 ntBASIC19.17■□□□□ 0.66
ATN1P54259 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.17■□□□□ 0.66
ATN1P54259 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.17■□□□□ 0.66
ATN1P54259 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.17■□□□□ 0.66
ATN1P54259 FAM86C2P-203ENST00000528684 1004 ntBASIC19.17■□□□□ 0.66
ATN1P54259 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC19.17■□□□□ 0.66
ATN1P54259 AL008721.1-201ENST00000609964 604 ntBASIC19.17■□□□□ 0.66
ATN1P54259 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.17■□□□□ 0.66
ATN1P54259 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.17■□□□□ 0.66
ATN1P54259 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.17■□□□□ 0.66
ATN1P54259 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATN1P54259 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATN1P54259 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATN1P54259 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.16■□□□□ 0.66
ATN1P54259 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.16■□□□□ 0.66
ATN1P54259 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATN1P54259 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.16■□□□□ 0.66
ATN1P54259 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.16■□□□□ 0.66
ATN1P54259 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
ATN1P54259 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATN1P54259 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATN1P54259 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATN1P54259 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATN1P54259 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.16■□□□□ 0.66
ATN1P54259 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATN1P54259 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.16■□□□□ 0.66
ATN1P54259 AC107890.1-201ENST00000422478 521 ntBASIC19.16■□□□□ 0.66
ATN1P54259 AC125807.1-201ENST00000483097 614 ntBASIC19.16■□□□□ 0.66
ATN1P54259 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms