Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.21■□□□□ 0.51
MMP13P45452 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.21■□□□□ 0.51
MMP13P45452 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
MMP13P45452 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.21■□□□□ 0.51
MMP13P45452 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
MMP13P45452 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 AC105020.1-201ENST00000435356 2205 ntBASIC18.21■□□□□ 0.51
MMP13P45452 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.21■□□□□ 0.51
MMP13P45452 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.21■□□□□ 0.51
MMP13P45452 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.21■□□□□ 0.51
MMP13P45452 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 AC116407.2-201ENST00000613639 860 ntBASIC18.21■□□□□ 0.51
MMP13P45452 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
MMP13P45452 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.21■□□□□ 0.51
MMP13P45452 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
MMP13P45452 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.21■□□□□ 0.51
MMP13P45452 AC106886.4-201ENST00000623557 2502 ntBASIC18.21■□□□□ 0.51
MMP13P45452 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.21■□□□□ 0.51
MMP13P45452 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP13P45452 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
MMP13P45452 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
MMP13P45452 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
MMP13P45452 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.2■□□□□ 0.5
MMP13P45452 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MMP13P45452 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
MMP13P45452 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.2■□□□□ 0.5
MMP13P45452 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MMP13P45452 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.2■□□□□ 0.5
MMP13P45452 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.2■□□□□ 0.5
MMP13P45452 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.2■□□□□ 0.5
MMP13P45452 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MMP13P45452 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
MMP13P45452 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.2■□□□□ 0.5
MMP13P45452 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
MMP13P45452 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.2■□□□□ 0.5
MMP13P45452 KRT18P1-202ENST00000452408 1331 ntBASIC18.2■□□□□ 0.5
MMP13P45452 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
MMP13P45452 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.2■□□□□ 0.5
MMP13P45452 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.2■□□□□ 0.5
MMP13P45452 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP13P45452 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MMP13P45452 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP13P45452 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
MMP13P45452 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP13P45452 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP13P45452 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP13P45452 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP13P45452 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP13P45452 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MMP13P45452 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.19■□□□□ 0.5
MMP13P45452 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.19■□□□□ 0.5
MMP13P45452 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.19■□□□□ 0.5
MMP13P45452 AC011840.4-201ENST00000578471 627 ntBASIC18.19■□□□□ 0.5
MMP13P45452 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.19■□□□□ 0.5
MMP13P45452 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP13P45452 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MMP13P45452 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP13P45452 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MMP13P45452 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
MMP13P45452 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP13P45452 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP13P45452 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MMP13P45452 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MMP13P45452 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.18■□□□□ 0.5
MMP13P45452 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms