Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF254O75437 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF254O75437 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF254O75437 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF254O75437 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF254O75437 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF254O75437 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF254O75437 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF254O75437 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF254O75437 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF254O75437 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF254O75437 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF254O75437 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF254O75437 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF254O75437 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
ZNF254O75437 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
ZNF254O75437 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF254O75437 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF254O75437 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF254O75437 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ZNF254O75437 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.55■□□□□ 0.08
ZNF254O75437 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ZNF254O75437 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ZNF254O75437 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ZNF254O75437 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.55■□□□□ 0.08
ZNF254O75437 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
ZNF254O75437 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF254O75437 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF254O75437 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ZNF254O75437 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.55■□□□□ 0.08
ZNF254O75437 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF254O75437 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ZNF254O75437 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF254O75437 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF254O75437 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
ZNF254O75437 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
ZNF254O75437 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF254O75437 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 AC087499.1-201ENST00000418141 1075 ntBASIC15.54■□□□□ 0.08
ZNF254O75437 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.54■□□□□ 0.08
ZNF254O75437 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.54■□□□□ 0.08
ZNF254O75437 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ZNF254O75437 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF254O75437 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
ZNF254O75437 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ZNF254O75437 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF254O75437 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ZNF254O75437 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
ZNF254O75437 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF254O75437 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF254O75437 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.53■□□□□ 0.08
ZNF254O75437 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.53■□□□□ 0.08
ZNF254O75437 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.53■□□□□ 0.08
ZNF254O75437 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.53■□□□□ 0.08
ZNF254O75437 OR6D1P-203ENST00000641209 4860 ntBASIC15.53■□□□□ 0.08
ZNF254O75437 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.53■□□□□ 0.08
ZNF254O75437 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.53■□□□□ 0.08
ZNF254O75437 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF254O75437 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.53■□□□□ 0.08
ZNF254O75437 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF254O75437 AL596275.1-201ENST00000423464 877 ntBASIC15.53■□□□□ 0.08
ZNF254O75437 BX664615.1-201ENST00000443558 458 ntBASIC15.53■□□□□ 0.08
ZNF254O75437 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF254O75437 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.53■□□□□ 0.08
ZNF254O75437 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms