Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
MSI1O43347 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.17■□□□□ 0.5
MSI1O43347 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
MSI1O43347 FAM215A-202ENST00000632077 792 ntBASIC18.17■□□□□ 0.5
MSI1O43347 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
MSI1O43347 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MSI1O43347 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MSI1O43347 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MSI1O43347 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MSI1O43347 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MSI1O43347 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
MSI1O43347 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
MSI1O43347 AC020916.1-201ENST00000587762 1774 ntBASIC18.17■□□□□ 0.5
MSI1O43347 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
MSI1O43347 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.17■□□□□ 0.5
MSI1O43347 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.17■□□□□ 0.5
MSI1O43347 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MSI1O43347 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MSI1O43347 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSI1O43347 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSI1O43347 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.16■□□□□ 0.5
MSI1O43347 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSI1O43347 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MSI1O43347 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSI1O43347 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MSI1O43347 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSI1O43347 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.16■□□□□ 0.5
MSI1O43347 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSI1O43347 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSI1O43347 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MSI1O43347 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSI1O43347 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSI1O43347 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.16■□□□□ 0.5
MSI1O43347 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.16■□□□□ 0.5
MSI1O43347 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.16■□□□□ 0.5
MSI1O43347 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.16■□□□□ 0.5
MSI1O43347 AP001005.1-201ENST00000571755 1248 ntBASIC18.16■□□□□ 0.5
MSI1O43347 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.16■□□□□ 0.5
MSI1O43347 AC064862.7-201ENST00000604520 867 ntBASIC18.16■□□□□ 0.5
MSI1O43347 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.16■□□□□ 0.5
MSI1O43347 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.16■□□□□ 0.5
MSI1O43347 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
MSI1O43347 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.16■□□□□ 0.5
MSI1O43347 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSI1O43347 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.16■□□□□ 0.5
MSI1O43347 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MSI1O43347 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSI1O43347 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSI1O43347 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.16■□□□□ 0.5
MSI1O43347 LYSMD4-203ENST00000378904 2122 ntBASIC18.16■□□□□ 0.5
MSI1O43347 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSI1O43347 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 OR7E14P-202ENST00000530490 1290 ntBASIC18.15■□□□□ 0.5
MSI1O43347 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MSI1O43347 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.15■□□□□ 0.5
MSI1O43347 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.15■□□□□ 0.5
MSI1O43347 AL139327.4-201ENST00000612362 153 ntBASIC18.15■□□□□ 0.5
MSI1O43347 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.15■□□□□ 0.5
MSI1O43347 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.15■□□□□ 0.5
MSI1O43347 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.15■□□□□ 0.5
MSI1O43347 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
MSI1O43347 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MSI1O43347 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.15■□□□□ 0.5
MSI1O43347 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSI1O43347 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
MSI1O43347 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
MSI1O43347 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
MSI1O43347 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MSI1O43347 AC046185.3-201ENST00000623228 1824 ntBASIC18.14■□□□□ 0.5
MSI1O43347 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
MSI1O43347 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.14■□□□□ 0.49
MSI1O43347 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSI1O43347 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSI1O43347 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSI1O43347 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.14■□□□□ 0.49
MSI1O43347 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSI1O43347 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
MSI1O43347 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.14■□□□□ 0.49
MSI1O43347 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSI1O43347 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSI1O43347 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSI1O43347 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MSI1O43347 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.14■□□□□ 0.49
MSI1O43347 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms