Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
MSH5O43196 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
MSH5O43196 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
MSH5O43196 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.99■■□□□ 1.43
MSH5O43196 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
MSH5O43196 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
MSH5O43196 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.98■■□□□ 1.43
MSH5O43196 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC23.98■■□□□ 1.43
MSH5O43196 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.98■■□□□ 1.43
MSH5O43196 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC23.98■■□□□ 1.43
MSH5O43196 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC23.98■■□□□ 1.43
MSH5O43196 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
MSH5O43196 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 OR13Z1P-201ENST00000416141 834 ntBASIC23.98■■□□□ 1.43
MSH5O43196 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
MSH5O43196 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
MSH5O43196 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23.98■■□□□ 1.43
MSH5O43196 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 AC092183.1-201ENST00000469884 875 ntBASIC23.98■■□□□ 1.43
MSH5O43196 MKRN1-211ENST00000480552 906 ntTSL 5 BASIC23.98■■□□□ 1.43
MSH5O43196 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC23.98■■□□□ 1.43
MSH5O43196 AC093297.2-201ENST00000503452 738 ntTSL 2 BASIC23.98■■□□□ 1.43
MSH5O43196 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
MSH5O43196 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC23.98■■□□□ 1.43
MSH5O43196 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC23.98■■□□□ 1.43
MSH5O43196 MTATP6P25-201ENST00000574491 261 ntBASIC23.98■■□□□ 1.43
MSH5O43196 MIR3917-201ENST00000580971 93 ntBASIC23.98■■□□□ 1.43
MSH5O43196 AC090616.6-201ENST00000582640 721 ntBASIC23.98■■□□□ 1.43
MSH5O43196 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
MSH5O43196 AC087683.2-201ENST00000611384 326 ntBASIC23.98■■□□□ 1.43
MSH5O43196 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC23.98■■□□□ 1.43
MSH5O43196 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
MSH5O43196 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
MSH5O43196 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.98■■□□□ 1.43
MSH5O43196 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC23.98■■□□□ 1.43
MSH5O43196 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MSH5O43196 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
MSH5O43196 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
MSH5O43196 AC126763.1-201ENST00000552015 2118 ntBASIC23.98■■□□□ 1.43
MSH5O43196 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 AKR1C7P-201ENST00000305623 895 ntBASIC23.97■■□□□ 1.43
MSH5O43196 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.97■■□□□ 1.43
MSH5O43196 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC23.97■■□□□ 1.43
MSH5O43196 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC23.97■■□□□ 1.43
MSH5O43196 SLC25A1P1-201ENST00000528351 927 ntBASIC23.97■■□□□ 1.43
MSH5O43196 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 AC234775.3-201ENST00000564612 656 ntBASIC23.97■■□□□ 1.43
MSH5O43196 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.97■■□□□ 1.43
MSH5O43196 AC006557.1-201ENST00000591211 1085 ntBASIC23.97■■□□□ 1.43
MSH5O43196 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
MSH5O43196 AC100847.1-201ENST00000611316 481 ntBASIC23.97■■□□□ 1.43
MSH5O43196 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC23.97■■□□□ 1.43
MSH5O43196 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC23.97■■□□□ 1.43
MSH5O43196 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
MSH5O43196 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC23.96■■□□□ 1.43
MSH5O43196 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.96■■□□□ 1.43
MSH5O43196 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
MSH5O43196 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
MSH5O43196 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
MSH5O43196 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.96■■□□□ 1.43
MSH5O43196 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
MSH5O43196 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
MSH5O43196 AC233702.3-201ENST00000578656 1387 ntBASIC23.96■■□□□ 1.43
MSH5O43196 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
MSH5O43196 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC23.96■■□□□ 1.43
MSH5O43196 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MSH5O43196 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC23.96■■□□□ 1.43
MSH5O43196 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.96■■□□□ 1.43
MSH5O43196 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
MSH5O43196 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.96■■□□□ 1.43
MSH5O43196 VN1R11P-201ENST00000407795 868 ntBASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms