Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC11.63□□□□□ -0.55
RTL8CO15255 AC092902.6-201ENST00000641783 218 ntBASIC11.63□□□□□ -0.55
RTL8CO15255 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
RTL8CO15255 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RTL8CO15255 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.63□□□□□ -0.55
RTL8CO15255 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RTL8CO15255 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC11.63□□□□□ -0.55
RTL8CO15255 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RTL8CO15255 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RTL8CO15255 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
RTL8CO15255 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC11.63□□□□□ -0.55
RTL8CO15255 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
RTL8CO15255 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC11.63□□□□□ -0.55
RTL8CO15255 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RTL8CO15255 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RTL8CO15255 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
RTL8CO15255 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
RTL8CO15255 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC11.62□□□□□ -0.55
RTL8CO15255 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
RTL8CO15255 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC11.62□□□□□ -0.55
RTL8CO15255 CROCCP3-202ENST00000420820 1947 ntBASIC11.62□□□□□ -0.55
RTL8CO15255 EML3-217ENST00000531557 2509 ntTSL 5 BASIC11.62□□□□□ -0.55
RTL8CO15255 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC11.62□□□□□ -0.55
RTL8CO15255 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
RTL8CO15255 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RTL8CO15255 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
RTL8CO15255 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
RTL8CO15255 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC11.62□□□□□ -0.55
RTL8CO15255 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTL8CO15255 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC11.62□□□□□ -0.55
RTL8CO15255 AC093010.1-201ENST00000473625 1624 ntBASIC11.62□□□□□ -0.55
RTL8CO15255 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTL8CO15255 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTL8CO15255 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RTL8CO15255 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.62□□□□□ -0.55
RTL8CO15255 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTL8CO15255 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
RTL8CO15255 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.62□□□□□ -0.55
RTL8CO15255 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RTL8CO15255 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.62□□□□□ -0.55
RTL8CO15255 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.62□□□□□ -0.55
RTL8CO15255 HLA-J-203ENST00000494367 1087 ntBASIC11.62□□□□□ -0.55
RTL8CO15255 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.62□□□□□ -0.55
RTL8CO15255 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC11.62□□□□□ -0.55
RTL8CO15255 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.62□□□□□ -0.55
RTL8CO15255 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RTL8CO15255 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.62□□□□□ -0.55
RTL8CO15255 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.62□□□□□ -0.55
RTL8CO15255 AC023141.13-201ENST00000604991 943 ntBASIC11.62□□□□□ -0.55
RTL8CO15255 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11.62□□□□□ -0.55
RTL8CO15255 AC105339.1-204ENST00000636249 355 ntBASIC11.62□□□□□ -0.55
RTL8CO15255 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.62□□□□□ -0.55
RTL8CO15255 AC007064.4-201ENST00000637740 555 ntBASIC11.62□□□□□ -0.55
RTL8CO15255 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC11.62□□□□□ -0.55
RTL8CO15255 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTL8CO15255 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTL8CO15255 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC11.62□□□□□ -0.55
RTL8CO15255 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
RTL8CO15255 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTL8CO15255 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTL8CO15255 AC073592.3-201ENST00000625118 1834 ntBASIC11.62□□□□□ -0.55
RTL8CO15255 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
RTL8CO15255 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTL8CO15255 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RTL8CO15255 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RTL8CO15255 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC11.62□□□□□ -0.55
RTL8CO15255 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RTL8CO15255 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTL8CO15255 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTL8CO15255 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
RTL8CO15255 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTL8CO15255 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTL8CO15255 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTL8CO15255 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RTL8CO15255 AP000974.1-201ENST00000623909 2387 ntBASIC11.61□□□□□ -0.55
RTL8CO15255 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC11.61□□□□□ -0.55
RTL8CO15255 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.61□□□□□ -0.55
RTL8CO15255 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RTL8CO15255 AP002414.1-201ENST00000391405 1147 ntBASIC11.61□□□□□ -0.55
RTL8CO15255 PAWRP1-201ENST00000451083 565 ntBASIC11.61□□□□□ -0.55
RTL8CO15255 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
RTL8CO15255 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.61□□□□□ -0.55
RTL8CO15255 AC109322.1-201ENST00000524499 1264 ntBASIC11.61□□□□□ -0.55
RTL8CO15255 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RTL8CO15255 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.61□□□□□ -0.55
RTL8CO15255 AC025678.2-201ENST00000562061 970 ntBASIC11.61□□□□□ -0.55
RTL8CO15255 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.61□□□□□ -0.55
RTL8CO15255 INO80C-206ENST00000586489 594 ntTSL 3 BASIC11.61□□□□□ -0.55
RTL8CO15255 AC005498.2-205ENST00000593218 784 ntBASIC11.61□□□□□ -0.55
RTL8CO15255 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC11.61□□□□□ -0.55
RTL8CO15255 AC019129.2-201ENST00000609837 1235 ntBASIC11.61□□□□□ -0.55
RTL8CO15255 GGTLC5P-201ENST00000617623 998 ntBASIC11.61□□□□□ -0.55
RTL8CO15255 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
RTL8CO15255 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RTL8CO15255 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC11.61□□□□□ -0.55
RTL8CO15255 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTL8CO15255 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
RTL8CO15255 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
RTL8CO15255 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTL8CO15255 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms