Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN4O14493 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN4O14493 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN4O14493 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN4O14493 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN4O14493 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN4O14493 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN4O14493 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CLDN4O14493 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN4O14493 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CLDN4O14493 UNC93B7-201ENST00000509439 705 ntBASIC16.5■□□□□ 0.23
CLDN4O14493 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN4O14493 RN7SL510P-201ENST00000581311 263 ntBASIC16.5■□□□□ 0.23
CLDN4O14493 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN4O14493 MTDHP3-201ENST00000594186 672 ntBASIC16.5■□□□□ 0.23
CLDN4O14493 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN4O14493 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN4O14493 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN4O14493 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN4O14493 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLDN4O14493 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN4O14493 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN4O14493 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN4O14493 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CLDN4O14493 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN4O14493 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN4O14493 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN4O14493 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN4O14493 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN4O14493 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN4O14493 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN4O14493 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN4O14493 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLDN4O14493 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CLDN4O14493 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CLDN4O14493 KLF4P1-201ENST00000412782 1185 ntBASIC16.49■□□□□ 0.23
CLDN4O14493 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN4O14493 SCARNA2-201ENST00000458748 420 ntBASIC16.49■□□□□ 0.23
CLDN4O14493 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN4O14493 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN4O14493 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CLDN4O14493 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.49■□□□□ 0.23
CLDN4O14493 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.49■□□□□ 0.23
CLDN4O14493 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.49■□□□□ 0.23
CLDN4O14493 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLDN4O14493 AL121894.2-201ENST00000602977 491 ntBASIC16.49■□□□□ 0.23
CLDN4O14493 AC008608.2-201ENST00000606089 416 ntBASIC16.49■□□□□ 0.23
CLDN4O14493 AP001269.4-201ENST00000609611 512 ntBASIC16.49■□□□□ 0.23
CLDN4O14493 AL355877.3-201ENST00000622820 899 ntBASIC16.49■□□□□ 0.23
CLDN4O14493 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN4O14493 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
CLDN4O14493 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLDN4O14493 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN4O14493 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN4O14493 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN4O14493 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLDN4O14493 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLDN4O14493 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN4O14493 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN4O14493 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN4O14493 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN4O14493 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN4O14493 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN4O14493 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN4O14493 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN4O14493 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CLDN4O14493 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN4O14493 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN4O14493 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN4O14493 STK19B-204ENST00000512515 211 ntBASIC16.48■□□□□ 0.23
CLDN4O14493 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN4O14493 STK25P1-201ENST00000585406 838 ntBASIC16.48■□□□□ 0.23
CLDN4O14493 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN4O14493 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN4O14493 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN4O14493 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CLDN4O14493 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms