Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 UXT-AS1-201ENST00000590504 1525 ntBASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 AC132938.6-201ENST00000623828 1655 ntBASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C1QTNF9BB2RNN3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.33■□□□□ 0.21
C1QTNF9BB2RNN3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.33■□□□□ 0.21
C1QTNF9BB2RNN3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.33■□□□□ 0.21
C1QTNF9BB2RNN3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C1QTNF9BB2RNN3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
C1QTNF9BB2RNN3 AL032819.2-201ENST00000624543 2162 ntBASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 AC004945.1-201ENST00000416738 983 ntBASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 IGHV3-62-201ENST00000520057 340 ntBASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 MIR4525-201ENST00000580000 75 ntBASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C1QTNF9BB2RNN3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 GNAS-203ENST00000306120 1878 ntBASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 AC140658.5-201ENST00000438532 169 ntBASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 SPTLC1P1-201ENST00000447199 261 ntBASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 AL133338.1-201ENST00000565695 1517 ntBASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 TP53TG3HP-202ENST00000569755 579 ntBASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 IGHV3-72-202ENST00000621503 303 ntBASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 AC068587.10-201ENST00000641210 219 ntBASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C1QTNF9BB2RNN3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 AC079776.1-201ENST00000401540 1152 ntBASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 RARRES2P8-201ENST00000566335 367 ntBASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 BX323043.1-201ENST00000641006 1765 ntBASIC16.31■□□□□ 0.2
C1QTNF9BB2RNN3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF9BB2RNN3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms