Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb3Q91XZ7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb3Q91XZ7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Pcdhb3Q91XZ7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
Pcdhb3Q91XZ7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb3Q91XZ7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb3Q91XZ7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Pcdhb3Q91XZ7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb3Q91XZ7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Pcdhb3Q91XZ7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.94■■□□□ 1.1
Pcdhb3Q91XZ7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.94■■□□□ 1.1
Pcdhb3Q91XZ7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.94■■□□□ 1.1
Pcdhb3Q91XZ7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb3Q91XZ7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Pcdhb3Q91XZ7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb3Q91XZ7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Pcdhb3Q91XZ7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb3Q91XZ7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb3Q91XZ7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb3Q91XZ7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb3Q91XZ7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb3Q91XZ7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb3Q91XZ7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb3Q91XZ7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb3Q91XZ7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
Pcdhb3Q91XZ7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb3Q91XZ7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb3Q91XZ7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb3Q91XZ7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb3Q91XZ7 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.91■■□□□ 1.1
Pcdhb3Q91XZ7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb3Q91XZ7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb3Q91XZ7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb3Q91XZ7 Gm30023-201ENSMUST00000197970 889 ntBASIC21.91■■□□□ 1.1
Pcdhb3Q91XZ7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb3Q91XZ7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb3Q91XZ7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.9■■□□□ 1.1
Pcdhb3Q91XZ7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb3Q91XZ7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb3Q91XZ7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb3Q91XZ7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Pcdhb3Q91XZ7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb3Q91XZ7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb3Q91XZ7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Pcdhb3Q91XZ7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.88■■□□□ 1.09
Pcdhb3Q91XZ7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.88■■□□□ 1.09
Pcdhb3Q91XZ7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb3Q91XZ7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.88■■□□□ 1.09
Pcdhb3Q91XZ7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.87■■□□□ 1.09
Pcdhb3Q91XZ7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb3Q91XZ7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.87■■□□□ 1.09
Pcdhb3Q91XZ7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb3Q91XZ7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb3Q91XZ7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb3Q91XZ7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Pcdhb3Q91XZ7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Pcdhb3Q91XZ7 Gm11599-201ENSMUST00000118720 878 ntBASIC21.86■■□□□ 1.09
Pcdhb3Q91XZ7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb3Q91XZ7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Pcdhb3Q91XZ7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb3Q91XZ7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.85■■□□□ 1.09
Pcdhb3Q91XZ7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb3Q91XZ7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb3Q91XZ7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb3Q91XZ7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb3Q91XZ7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.83■■□□□ 1.09
Pcdhb3Q91XZ7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb3Q91XZ7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb3Q91XZ7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb3Q91XZ7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb3Q91XZ7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.82■■□□□ 1.08
Pcdhb3Q91XZ7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb3Q91XZ7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.81■■□□□ 1.08
Pcdhb3Q91XZ7 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.81■■□□□ 1.08
Pcdhb3Q91XZ7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb3Q91XZ7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb3Q91XZ7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb3Q91XZ7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb3Q91XZ7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Pcdhb3Q91XZ7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb3Q91XZ7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb3Q91XZ7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb3Q91XZ7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb3Q91XZ7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb3Q91XZ7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb3Q91XZ7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
Pcdhb3Q91XZ7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb3Q91XZ7 Particl-201ENSMUST00000205370 1560 ntBASIC21.79■■□□□ 1.08
Pcdhb3Q91XZ7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb3Q91XZ7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb3Q91XZ7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
Pcdhb3Q91XZ7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb3Q91XZ7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhb3Q91XZ7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb3Q91XZ7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb3Q91XZ7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.79■■□□□ 1.08
Pcdhb3Q91XZ7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb3Q91XZ7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb3Q91XZ7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb3Q91XZ7 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms