Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cuedc1Q8R3V6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Cuedc1Q8R3V6 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.88■□□□□ 0.77
Cuedc1Q8R3V6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cuedc1Q8R3V6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cuedc1Q8R3V6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cuedc1Q8R3V6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cuedc1Q8R3V6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cuedc1Q8R3V6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cuedc1Q8R3V6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cuedc1Q8R3V6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cuedc1Q8R3V6 Gm13238-201ENSMUST00000117655 780 ntBASIC19.86■□□□□ 0.77
Cuedc1Q8R3V6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Cuedc1Q8R3V6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.86■□□□□ 0.77
Cuedc1Q8R3V6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cuedc1Q8R3V6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cuedc1Q8R3V6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cuedc1Q8R3V6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Cuedc1Q8R3V6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Cuedc1Q8R3V6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cuedc1Q8R3V6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cuedc1Q8R3V6 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.85■□□□□ 0.77
Cuedc1Q8R3V6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.85■□□□□ 0.77
Cuedc1Q8R3V6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cuedc1Q8R3V6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cuedc1Q8R3V6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cuedc1Q8R3V6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cuedc1Q8R3V6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cuedc1Q8R3V6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cuedc1Q8R3V6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cuedc1Q8R3V6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cuedc1Q8R3V6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.84■□□□□ 0.77
Cuedc1Q8R3V6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cuedc1Q8R3V6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cuedc1Q8R3V6 Gm14117-201ENSMUST00000122417 843 ntBASIC19.83■□□□□ 0.77
Cuedc1Q8R3V6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.83■□□□□ 0.77
Cuedc1Q8R3V6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cuedc1Q8R3V6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Cuedc1Q8R3V6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cuedc1Q8R3V6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.82■□□□□ 0.76
Cuedc1Q8R3V6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.82■□□□□ 0.76
Cuedc1Q8R3V6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cuedc1Q8R3V6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cuedc1Q8R3V6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cuedc1Q8R3V6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cuedc1Q8R3V6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cuedc1Q8R3V6 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.81■□□□□ 0.76
Cuedc1Q8R3V6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Cuedc1Q8R3V6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cuedc1Q8R3V6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Cuedc1Q8R3V6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cuedc1Q8R3V6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cuedc1Q8R3V6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cuedc1Q8R3V6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cuedc1Q8R3V6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cuedc1Q8R3V6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cuedc1Q8R3V6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cuedc1Q8R3V6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cuedc1Q8R3V6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.79■□□□□ 0.76
Cuedc1Q8R3V6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cuedc1Q8R3V6 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.79■□□□□ 0.76
Cuedc1Q8R3V6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cuedc1Q8R3V6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cuedc1Q8R3V6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cuedc1Q8R3V6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cuedc1Q8R3V6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cuedc1Q8R3V6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.78■□□□□ 0.76
Cuedc1Q8R3V6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cuedc1Q8R3V6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cuedc1Q8R3V6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cuedc1Q8R3V6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cuedc1Q8R3V6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cuedc1Q8R3V6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cuedc1Q8R3V6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.77■□□□□ 0.76
Cuedc1Q8R3V6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.77■□□□□ 0.76
Cuedc1Q8R3V6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cuedc1Q8R3V6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cuedc1Q8R3V6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cuedc1Q8R3V6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cuedc1Q8R3V6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
Cuedc1Q8R3V6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cuedc1Q8R3V6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.76■□□□□ 0.75
Cuedc1Q8R3V6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cuedc1Q8R3V6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cuedc1Q8R3V6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cuedc1Q8R3V6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cuedc1Q8R3V6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cuedc1Q8R3V6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cuedc1Q8R3V6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
Cuedc1Q8R3V6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cuedc1Q8R3V6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cuedc1Q8R3V6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cuedc1Q8R3V6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cuedc1Q8R3V6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cuedc1Q8R3V6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cuedc1Q8R3V6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Cuedc1Q8R3V6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cuedc1Q8R3V6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cuedc1Q8R3V6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.74■□□□□ 0.75
Cuedc1Q8R3V6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms